LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g4697	ATGGGAACAAAGAGAGATTCTCCTGTGAATGTTTTGTCTCAATGGTTGAGGAAAAGATCAATGAAAGTGAAGATTCTTTTAGGGACATTGCTAGCTTTTTGTGCTTTGGTGGTTTTGAAGTTTACTATCAAAGATTCAGATTTTTTCTTCAAAGCTTCTGAAACTATTCATATTGTTGGCCTTATTGTTCTCATTTACAAGCTCTTTGCTCACAAGACTTGCTCCGGTTTATCCCTCAAGAGTCAAGAGCTGACAGCATTATTCCTAACAACAAGATTAGGTTGCAGTATTTACATGGAGTCTAACATCCACACTGTGCTGGATCTGATATTTCTCTTGTCAACATTACTTGTTATTTGGTTGATAAGATTCAAGTTGAAGTCGTCTTATATTAAGGAGTTTGACAACATGCGGTTATCCTTTCTGGCGGTGCCTTCGACAATTTTGGCGATATTAATACATCCATATACAAAGCATATCTGGATAGCTCGAGTCCTTTGGGCATTCTCTGTGTATTTGGAAACTATTTCAATTCTTCCTCAACTTCGTCATATGCAGAAAGCAAAGATAGTTGAAACATTCACAGGATATTATGTATTTGCACTTGGTGTCTCGAGATTCTTTGCACTAGCTTATTGGATTATTCATACCTATGATACTCGAGGGAAATATCTATATTTCATCGGCTATGGTTATCTCTGGATGTTGGCAGCTTTTTTATCAGAGATCATTCAGTCTTTCATCTTGGCGGACTTTTGCTACTATTATATGAAGAGCTTCATGCAAGGGCAGCTCTTGAGGAAAATGCCGGTTTAA	816	0.3738	MGTKRDSPVNVLSQWLRKRSMKVKILLGTLLAFCALVVLKFTIKDSDFFFKASETIHIVGLIVLIYKLFAHKTCSGLSLKSQELTALFLTTRLGCSIYMESNIHTVLDLIFLLSTLLVIWLIRFKLKSSYIKEFDNMRLSFLAVPSTILAILIHPYTKHIWIARVLWAFSVYLETISILPQLRHMQKAKIVETFTGYYVFALGVSRFFALAYWIIHTYDTRGKYLYFIGYGYLWMLAAFLSEIIQSFILADFCYYYMKSFMQGQLLRKMPV*	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g4697	271	PANTHER	ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED	1	270	-	-
	Psa4g4697	271	Pfam	ER lumen protein retaining receptor	73	215	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4697	271	PANTHER	ER LUMEN PROTEIN RETAINING RECEPTOR	1	270	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4697	271	PRINTS	ER lumen protein retaining receptor signature	49	68	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4697	271	PRINTS	ER lumen protein retaining receptor signature	76	96	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4697	271	PRINTS	ER lumen protein retaining receptor signature	167	187	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4697	271	PRINTS	ER lumen protein retaining receptor signature	189	203	IPR000133	GO:0006621\|GO:0016021\|GO:0046923

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g4697	Psa-Chr4	416140638	416147441	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa4g4697	1	271	Miscellaneous Gene Families	AT3G25160	57.721	4.09e-112	322

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g4697	-		K10949	gmx:100790733	387.882