LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g4690	ATGGAAGTTATTAATGTAAATCAATGGAATAATGAAGTTGATGATAACGAAGTTGAAGAAATAAGTTTGCAACGAAAGAGTGTTGTTGCTCAACATACTAGCAGCAGCAGTTCTAGCAGTTCAGATAACAACAACATAGAAGAAAAAGATGGAGGCTTAGACTTCATTGAATCGGAGACAAAACCGAAATTTGAAGTGGTGATAGCAGAAAGGAATGCTGAAATGATAATTCCACAAGAGAAAGAGAAAATTGATGAGAATGACACAATTTTACCTGCTTCTGATTCACCTCTTGATGAGGACTCTACTTCTTTGATCAATGTGACAAATGAGAGTGAGAGAGTTATCATAGTAAAAGAAAATGGTGAAGAAAGACAAGAATTTTATTTGGAGAATGTGTTTGAGAAACCACCATCACATGGATTTTACTGCCCTAATTGTAATGTTTGTATCCAAAAAGTTTATATTCAAAGGATCTACATTCAACCTATGCCACAAAATGAGACAATAAGATGCTCATCATGCTTCAGTTTCCTCATTCCAATAGGTAATTGGTTATTCCCTGGATTAGTATCTAACGGAGATGGACAATTAAACATTCAAAGTTCAATCACTGAACAAACACTCAATGTTTCATCACAACATGGTGAAGAGGTGCATAAATCCGTCACTAGAGGCACAGTAAAATCGGTCACTAAAACTGTAGATGAAGCAGGAGAAGAAACAGTGCAAATTATTGAAGATGTGGTCATTCATGGACCTCAGAAAAGTCAAGTTGTAACAAAGAAAAAACAGTTTTGGAGTAATTGGGGTGTTATAGGTGGAACATCTTCTCAAGCCTCTAAAACTGTCACTACAGAAAATAGAGATTGGAAAGTTATATCTTCTGTGTCTCAGACAACTTTGTCCAAACAACCTCAAACTGACTTTCCAGGCAAGAAACAGACGGATTTTGTGGAAGTTAAAGTTGATGGAGCATCCACAGGCTCTGGTGAAGAAGTAGTTCCTTCTGTAACTGAAAGAACGCCACTTCTTATTCATAGTAACCCAATTGTAGAAACAAATAGCAAGAAATTGGAGATTGTGAAAAGTATTGTGTATGGTGGTTTGACTGAATCATTAGCAAGTCTTAGTGTTGTAACTTCTGCAGCAAGTGCTGATGCTGCCACATTGAACATTGTTGCACTGGCTATCGCTAACCTGATTGGTGGACTTTTTGCCCTTGGTCATAATCTTAGGGAACTGAAAGCTGAACAACCAAAAAGATCCAACACAGAAGCAGCAGTGGTGGATCAATACAAGGAAGTATTAGGAGAGAGGAAGAATTTCATTCTTCATGCATTTATTGCAATCTTATCATTCATTATTTTTGGACTAATTCCTCCAGTTGTATATGGCTTCACGTTTCGCGAAAACGATGAAAAGGATTTCAAGCTAGCAGCAGTTGCAGGAGCTTCTGCTATATGCATCACACTTCTCTCTATTCTCAAAGCTTATATCAAGAGACCAAACAGTTACTTAACATATTTTCAAACAGTGTTTTTCTATGTTAGCACTGGTGGTGTTGCCACAGTGCTTTCTTACTTAGCTGGTGATATGATGAAGAAAATCATTGAAAAGCTTGGATGGTTTGAACCAGCATCAAGTTTGGTTTTTTCCTTGAAGAATCAACATGGATTGGGATCGTATTAA	1692	0.3706	MEVINVNQWNNEVDDNEVEEISLQRKSVVAQHTSSSSSSSSDNNNIEEKDGGLDFIESETKPKFEVVIAERNAEMIIPQEKEKIDENDTILPASDSPLDEDSTSLINVTNESERVIIVKENGEERQEFYLENVFEKPPSHGFYCPNCNVCIQKVYIQRIYIQPMPQNETIRCSSCFSFLIPIGNWLFPGLVSNGDGQLNIQSSITEQTLNVSSQHGEEVHKSVTRGTVKSVTKTVDEAGEETVQIIEDVVIHGPQKSQVVTKKKQFWSNWGVIGGTSSQASKTVTTENRDWKVISSVSQTTLSKQPQTDFPGKKQTDFVEVKVDGASTGSGEEVVPSVTERTPLLIHSNPIVETNSKKLEIVKSIVYGGLTESLASLSVVTSAASADAATLNIVALAIANLIGGLFALGHNLRELKAEQPKRSNTEAAVVDQYKEVLGERKNFILHAFIAILSFIIFGLIPPVVYGFTFRENDEKDFKLAAVAGASAICITLLSILKAYIKRPNSYLTYFQTVFFYVSTGGVATVLSYLAGDMMKKIIEKLGWFEPASSLVFSLKNQHGLGSY*	564

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g4690	563	PANTHER	FE(2+)/MN(2+) TRANSPORTER PCL1	19	551	IPR008217	GO:0005384\|GO:0030026
	Psa4g4690	563	MobiDBLite	consensus disorder prediction	25	54	-	-
	Psa4g4690	563	CDD	CCC1_like	362	531	-	-
	Psa4g4690	563	PANTHER	GLYCINE-RICH PROTEIN FAMILY	19	551	-	-
	Psa4g4690	563	MobiDBLite	consensus disorder prediction	26	46	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g4690	Psa-Chr4	415493483	415496428	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g4690	-		-	aprc:113850747	548.895