Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4643 ATGGAAGGGAAACAACAAGCACATACATTAGAAATCAACATTATTTCTGGACAAAGCATAACTGTCGATGGAAATTTACAGGCAGAGGATGCATACGTTGTTGTTCGTGCCGAATCTCTCAACTCTTGCACTACGAAAATGGCGAATGAGAATGAGGGTATGTTTTCATGGAATGAAAAATTCATGTTAGATATTCCGCCACATGCAAGTTTAGTGACGTTTGAAGTACAATGCAAAAAGTACAAAGGAATTCGTCCCGTTGGGGTGGCTAGGGTAGCACTTTCTGATCTTCTTGATGACAATGTTTTGTTCCAAAGTTGTGATCAAACTTTGAGTTATGGGTTGAGAGATTGGGATGGTAGGAAAAATGGTGTTATTAACTTTTCTGTGAGGAGGGTGACACGAGAGGATAATTTGTGTTTAGAAAAAGAACAGGATATAATAATGGTTAGTTCAAGTAGATTTGAGGATGTAGGGTTTAAGTGTGCCGAATTGTAA 498 0.3835 MEGKQQAHTLEINIISGQSITVDGNLQAEDAYVVVRAESLNSCTTKMANENEGMFSWNEKFMLDIPPHASLVTFEVQCKKYKGIRPVGVARVALSDLLDDNVLFQSCDQTLSYGLRDWDGRKNGVINFSVRRVTREDNLCLEKEQDIIMVSSSRFEDVGFKCAEL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4643 165 PANTHER INGRESSION PROTEIN FIC1 6 151 - -
Psa4g4643 165 SMART C2_3c 9 106 IPR000008 -
Psa4g4643 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 133 IPR035892 -
Psa4g4643 165 Pfam C2 domain 9 101 IPR000008 -
Psa4g4643 165 Gene3D C2 domain 7 132 IPR035892 -
Psa4g4643 165 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Psa4g4643 165 PANTHER C2 DOMAIN PROTEIN 6 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4643 Psa-Chr4 412395436 412396096 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4643 - - gmx:100802552 179.874