Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4642 ATGGGTTTAACCTCACGCACACTAGAAATCACAGTTATATCAGGTGAAAACATTCATGTAACCGAGGACGCATATGTTGTCGTTCGAGGTGAGTCTCTTGATTGTTACACGACAAAAACTGTGAAAGATAACAAATCGAGTTTTCTTTCATGGGATGAGATGTTTTTGTTGGACATGCCATTGCATGCAAGGTCAATCACGTTTGAAGTGCAATGCAAGAGATTCAAAAGTGTTCGGCCTATTGGAGTGGCGAGAATCGCGGTTGCGGACTTTCTCAACGGCGTCGAATCGGAAAACTGGAAGAAAAATGGAGTTATTCATTTTGGTGTGAGGGTGGTTGTGCCGGAGAAAATTTCAGTTACGGTGGCGGAAAAGGAAACTGTGGTGAATGGAAAGAGTTATAGTGACCGTTTGACTGGAATGGATTTTGGTGGCAAGAACTCTAATGGTGTTGTTGTTGGTATTCCGTTTTGGTGGAACTACCCTAACATTATTTAA 498 0.4217 MGLTSRTLEITVISGENIHVTEDAYVVVRGESLDCYTTKTVKDNKSSFLSWDEMFLLDMPLHARSITFEVQCKRFKSVRPIGVARIAVADFLNGVESENWKKNGVIHFGVRVVVPEKISVTVAEKETVVNGKSYSDRLTGMDFGGKNSNGVVVGIPFWWNYPNII* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4642 165 ProSiteProfiles C2 domain profile. 1 101 IPR000008 -
Psa4g4642 165 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 162 - -
Psa4g4642 165 Pfam C2 domain 7 101 IPR000008 -
Psa4g4642 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 108 IPR035892 -
Psa4g4642 165 SMART C2_3c 7 100 IPR000008 -
Psa4g4642 165 Gene3D C2 domain 3 124 IPR035892 -
Psa4g4642 165 PANTHER INGRESSION PROTEIN FIC1 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4642 Psa-Chr4 412378606 412379142 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4642 - - mtr:MTR_3g064780 246.514