Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4596 ATGCAGATTATGAGTAAGCGGACCCCTTCATGTCTCATATTTTCCATGACTCGTTTCTTTATCGTGAAAGTTGACATAACGGGTGGAAATATTCTCAAAATGATCATGGATTGCAAGGTTGGTTCTTCGAGCTCTGGTCTAGTGACAATACAATCCACTTTGTCCCTGATTCTCAAAAGAGGGAGCATGTTAAATTGTAACAAAGGAGGAAAGAGTTACTCGTCTTATAAATGGGCTAAATCTAGAGTAATCTTCTCCGATAAAGACCACCTTGATGTGGTTCTCTCTAATGTGAAAGATGTTGATGATGTATATGATGTTTATGATGTTGATGTTGTTTATGATGCTAATGATTTATTTGATGTTTATGATATTGATGATGTTTATGATGTTGATGATGCTTATGATGTTGATGATGTTTACAATGTTTATGATGTTGATGATGCTTATTATGTTTATGATGTTGATGATGTTGCATGCTTCCATTCTGCTTCATTTGGAAACCTGTTGATATTTCTTTGCACAGGAAGATATCGAAATCTTATTGAAAGAGTCTTGCAAGCTAGGCTTGTATATGGGAGCCCAAATATGAACCGGGCTGTTAGCTTTGAGTATATGAACAGACAATTAGTTTGGAACGAATTCTCGGAAATGTTACTGTTGCTTCTTCCTCTTCTTAATTCATCATCTGTGAGAAATCTTCTTCGGCCTTTTTCTAAGGATAAATCATCAAGTTCGGCTGAGGATAGCACTGCATGTCCCATTTGCCAGGCTACTCCAATCATTCCTTTTGTTGCTTTACCTTGTCAGCACAGATATTGTTACTATTGTCTGCGGACTCGATGCGCTGCTGCCACATCATTTAGGTGTTTGAGGTGCAGTGAGCCAGTTATTGCAATGCAACGGCATGGTGGTGTCTCCACGGAGTAA 930 0.3839 MQIMSKRTPSCLIFSMTRFFIVKVDITGGNILKMIMDCKVGSSSSGLVTIQSTLSLILKRGSMLNCNKGGKSYSSYKWAKSRVIFSDKDHLDVVLSNVKDVDDVYDVYDVDVVYDANDLFDVYDIDDVYDVDDAYDVDDVYNVYDVDDAYYVYDVDDVACFHSASFGNLLIFLCTGRYRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVRNLLRPFSKDKSSSSAEDSTACPICQATPIIPFVALPCQHRYCYYCLRTRCAAATSFRCLRCSEPVIAMQRHGGVSTE* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4596 309 ProSitePatterns Zinc finger RING-type signature. 269 278 IPR017907 -
Psa4g4596 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 304 IPR013083 -
Psa4g4596 309 SUPERFAMILY RING/U-box 247 298 - -
Psa4g4596 309 CDD RING-HC_PEX2 252 294 - -
Psa4g4596 309 Pfam Zinc finger, C3HC4 type (RING finger) 253 293 IPR018957 GO:0046872
Psa4g4596 309 Pfam Pex2 / Pex12 amino terminal region 160 231 IPR006845 -
Psa4g4596 309 PANTHER - 160 308 - -
Psa4g4596 309 ProSiteProfiles Zinc finger RING-type profile. 253 294 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4596 K06664 - gmx:100805856 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4596 4 410447746 410458544 Psa4g4596 4 410447746 410458544 ECH