Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4588 ATGGCGGACCACAACACCATCACCTCCCCGTTACTCCCCTCCGATCACCTAATCCTCACCGTCGACTCCGATTCCAACTCCGCCTCTTCCACCAACACCACCGCCTCTCCAATCTCCAATCCGTTCAGCGCGTTAGGTTTCAGCGGCGGAGAGTTGACTGTGCCGGCGGGGATAACGGTGGACCCGTTCCAGAACTATAAAGCAGGGATTAACAGTTTTTATGAATGGGTGAAGACGATTGTGTGTATTCCTTTAGCTTTGGTTCGGTTGGTGATATTTGGATTGTGTTTAGCGATAGGGTATGTAGCTACTAAGTTGGCACTTTATGGTTGGAAAGATAAAGAAAATCCTATGCCTAGGTGGAGGAGTAGGATTATGTGGATCACTAGAATTGCCGCCAGATTCATTCTCTTCTCTTTTGGCTATCATTGGATAAAACGGAAAGGAAAACCTGCCCCAAGGGATGTCGCTCCAATAATTGTATCTAATCATGTATCTTATATTGAGCCTATCTTCTATTTCTATGAATTATTTCCCACCATCGTGGCATCTGAGTCTCATGACTCCATACCCTTTGTTGGCACAATCATTAGAGCAATGCAGGTCATATATGTTAACAGGTTCTCACCGTCATCAAGGAAGCAGGCTGTAAGAGAAATAAAGAGAAGGGCTTCTTGCGATAGATTTCCTCGAGTACTTTTATTTCCCGAGGGAACTACTACTAACGGCCGGAACCTTATTTCCTTCCAACTCGGTGCATTTATCCCTGGGTACCCAATCCAGCCTATAATTGTGCGCTATCCTCATGTGCACTTTGATCAATCTTGGGGTAATGTTTCTTTGGGACAGCTTATGTTCAGGATGTTCACTCAATTCCATAATTTCTTTGAGGTAGAATATCTTCCTGTCATTTCACCCCTAGATGATAAAGAAACTGCTGTGCATTTTCGTAAACGGGCTAGCCATGCTATTGCAACTGCATTGAATACTGTCCAAACTGGACATTCTTATGGAGACATAATGCTTCATACGAGAGCACAAGAAGCAAAACAGGAGAACCCCTCGAGTTATATGGTTGAAATGGCCAAAGTGGAATCATTATTTCATATCAGTAGCTTGGAAGCTGTGGACTTTTTGGATAAATTCTTGGCTATGAATCCCGATCCCAGTGGCCGTGTTCAATACCGTGGCTTTTTGAGCGTTTTTAGACTCAGAGCTTGTCCTCTTGCTCAAAAGATATTTGCATTCATTGATGTGGAGAAGTGTGGGAAAATTACATTCAAACAGTTCTTGTATGGATCTGCACATGTCATGAAGCAGCCAGGGTTTTGTCAAGCCTGTGAAATAGCCTTTGCTGAGTGTGGCGGTGCAGTAAAGGGCTACATCGTCGAAGAAGAACTACGAGATTCCATCCAATCTGCTCTCCCTAGCTGGAATGAGGACGATGTCCATGGTCTTTTTATGTTACTTGATGAGGATAATGATGAAAAAATTTACAAGGATGATTTTCTTTCATGCCTCAGAAGAAATCCTCTTCTCATAGCTCTTTTTACACCTCAACCGGAGCTCAAGGAATCATGTGGTAATGGAGTGCTGGAGATAGTTTGA 1608 0.4353 MADHNTITSPLLPSDHLILTVDSDSNSASSTNTTASPISNPFSALGFSGGELTVPAGITVDPFQNYKAGINSFYEWVKTIVCIPLALVRLVIFGLCLAIGYVATKLALYGWKDKENPMPRWRSRIMWITRIAARFILFSFGYHWIKRKGKPAPRDVAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFSPSSRKQAVREIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPIIVRYPHVHFDQSWGNVSLGQLMFRMFTQFHNFFEVEYLPVISPLDDKETAVHFRKRASHAIATALNTVQTGHSYGDIMLHTRAQEAKQENPSSYMVEMAKVESLFHISSLEAVDFLDKFLAMNPDPSGRVQYRGFLSVFRLRACPLAQKIFAFIDVEKCGKITFKQFLYGSAHVMKQPGFCQACEIAFAECGGAVKGYIVEEELRDSIQSALPSWNEDDVHGLFMLLDEDNDEKIYKDDFLSCLRRNPLLIALFTPQPELKESCGNGVLEIV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4588 535 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 31 522 - -
Psa4g4588 535 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 31 522 - -
Psa4g4588 535 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 124 316 - -
Psa4g4588 535 Gene3D - 359 513 - -
Psa4g4588 535 ProSiteProfiles EF-hand calcium-binding domain profile. 478 513 IPR002048 GO:0005509
Psa4g4588 535 SMART plsc_2 158 268 IPR002123 GO:0016746
Psa4g4588 535 SUPERFAMILY EF-hand 369 517 IPR011992 -
Psa4g4588 535 CDD LPLAT_LPCAT1-like 133 341 IPR045252 GO:0008374
Psa4g4588 535 Pfam Acyltransferase 157 262 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4588 Psa-Chr4 409393905 409404260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4588 110 311 Acyl Lipid Metabolism Gene Families AT1G80950 31.169 6.61e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4588 K13510 - gmx:100818109 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4588 4 409393905 409404260 Psa4g4588 4 409393905 409404260 ECH