Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4569 ATGGGTGGTCCCGAAGCTAACGGCACGGAAACCGAGAAACCAACACAAGCGGTTCAACTGCATAGTGATTTTATTTTACCTGAAAATCCCGTTAACGGTTATGAAACCGTTACTAACAACCAAAGTAGTTACAGTGATGGCGGTGCAGATAGCAAAAACGATGGCCACGTAGGGTTTATTCCTCCTCATTCACTTCTCCCGACGCCGGTACCACCGGAGGTTTTTCAAAGAAACAAAAACGATGAATCTCCGCCGAGTATCTTCGTCTCCAGCACTATGCCGGATTTCGGAAGCTTCATCCGTCAGCGGAGCAGTGATTTATCGACCGCGATTGCAAAACGAGTTTCATCGTTTAGAAAATCCATGGAGGAGAGAGAGGAGAGCGATGAGAACGATATGATCAAGAATAACGATCGGAATCAGGAAGTGACGGAATTCAATCTTTCAGGTCTCAAGGTTGTTGTGAAGGTGAAACCGGAGGAAGAACCAGCGATGAAAGGGAGGATAACGTTCTTCTCGAAGTCCGGATGCAGAGACTGTACGGCGGTGAGGAGATTCTTCAAAGAGAAAGAGCTGAAGTTCGTTGAAATCAACGTCGACGTGTTTCGCGAGAGGGAGAAAGAGCTACGAGACAGAACAGGAAATACTACTGTTCCGATGATTTTCTTCAACGAGAAGCTTATCGGAGGGTTAGTCGCGTTGAACTCGCTTCGAAACAGCGGAGAGTTTGATCGGAGGTTGACGGAGATGGTGGTTGAGAAATTTGCTGGCGATGATGCACCGTTACCGCCTGTCTACGGTTGTGATAATATCGAGGATGATCGAACGGATGAGATGGTTGGACTTGTTAGTCTTTTACGGCGGAAATTGTTCGTTCAGGATTGGTTGAGGAGAATGAAAATCGTTAAGAATTGTTTCGAAGGGAACGAGTTTGTGGAGGTTGTGATTCAACACTTCAAGTGCGCGCGTAACGAGGCTGTTGATATTGGAAAAGAGTTATCCAGAAAGCACTTCATCCATCATGTTTCCGGGGATAATGACTTTGTAGACGGAAATAACTTGTATCGTTTCCTTGAGCATGAACCATTTACCCCAAAATGCTTTAATTTCCGTGGTGCCGTAAATGACAATGAACCAAAGGCAGCAGCTTCAGTTTGCGACAGGCTTACCAAGATTATGTCTGCCATTCTTGAGTCTTATGCTTCTGATGATAGACGACGTGTTGATTATGCGGCCATTAGCAAAAGCGAAGAATTTCGTAGGTATGTAAATATGACTCAGGATTTGCAGCGAGTCAATATCTGCGAACTATCGGAAAATGAGAAGCTTGCCTTCTTCTTAAATTTATATAATGCCATGGTCATACATGCTGTCATTAGCGTAGGGAGCCCAGAAGGTGTAATTGATAGGAGATCCTTCTTCAATGACTTCCTGTATTTGATTGGAGGACATCCTTATTCTCTTGCCATTATTGAAAATGGTATTCTCAGATGTAATCAGAGGTCACCATATTCCATAATGAAGCCCTTTAGCACCGGAGATAAACGGTTAGAGGTTGCTCTTGTCAAGTTGAACCCGTTATTCCATTTTGGACTTTGTAATGGTACAAAATCTAGCCCAAACGTGAGGTTCTTTTCACCCAATAGAGTTGTAGATGAATTAAGAGGTGCTGCAAGAGAGATCTTTGAGAATGGTGGCATTGAAGTGGACCTAGAGAAGAGAACTGTTCATCTCCCACGGATTTTCAAGTGGTTCAGTGGAGATTTTGGACAAGAGCAAGAAATACTCAAGTGGATAGTTAATTACTTGGAACCAAATAAAGCAGGTCTATTGACACATCTCTTAAGCGATAGTGAACCAGTTAATATATCTTACCAGAATTTCGATTGGTCGTTAAATTCTTGA 1905 0.4336 MGGPEANGTETEKPTQAVQLHSDFILPENPVNGYETVTNNQSSYSDGGADSKNDGHVGFIPPHSLLPTPVPPEVFQRNKNDESPPSIFVSSTMPDFGSFIRQRSSDLSTAIAKRVSSFRKSMEEREESDENDMIKNNDRNQEVTEFNLSGLKVVVKVKPEEEPAMKGRITFFSKSGCRDCTAVRRFFKEKELKFVEINVDVFREREKELRDRTGNTTVPMIFFNEKLIGGLVALNSLRNSGEFDRRLTEMVVEKFAGDDAPLPPVYGCDNIEDDRTDEMVGLVSLLRRKLFVQDWLRRMKIVKNCFEGNEFVEVVIQHFKCARNEAVDIGKELSRKHFIHHVSGDNDFVDGNNLYRFLEHEPFTPKCFNFRGAVNDNEPKAAASVCDRLTKIMSAILESYASDDRRRVDYAAISKSEEFRRYVNMTQDLQRVNICELSENEKLAFFLNLYNAMVIHAVISVGSPEGVIDRRSFFNDFLYLIGGHPYSLAIIENGILRCNQRSPYSIMKPFSTGDKRLEVALVKLNPLFHFGLCNGTKSSPNVRFFSPNRVVDELRGAAREIFENGGIEVDLEKRTVHLPRIFKWFSGDFGQEQEILKWIVNYLEPNKAGLLTHLLSDSEPVNISYQNFDWSLNS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4569 634 Pfam Protein of unknown function, DUF547 436 560 IPR006869 -
Psa4g4569 634 Pfam Glutaredoxin 169 228 IPR002109 -
Psa4g4569 634 ProSiteProfiles Glutaredoxin domain profile. 157 254 - -
Psa4g4569 634 Gene3D Glutaredoxin 163 251 - -
Psa4g4569 634 SMART DEP_3 286 359 IPR000591 GO:0035556
Psa4g4569 634 MobiDBLite consensus disorder prediction 29 52 - -
Psa4g4569 634 Gene3D - 275 411 IPR036388 -
Psa4g4569 634 CDD DEP 278 356 - -
Psa4g4569 634 SUPERFAMILY Thioredoxin-like 164 249 IPR036249 -
Psa4g4569 634 MobiDBLite consensus disorder prediction 32 49 - -
Psa4g4569 634 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 298 357 IPR000591 GO:0035556
Psa4g4569 634 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 40 634 - -
Psa4g4569 634 PANTHER F26K24.21 PROTEIN 40 634 - -
Psa4g4569 634 SUPERFAMILY "Winged helix" DNA-binding domain 278 379 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4569 Psa-Chr4 407739671 407745505 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4569 - - gmx:100810111 884.404