Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4546 ATGGGGAAAGTGGTGGTGTGCGCGACGGTGATCGGAGCTACGGCGGCATGTGCGGTGGCGACGGTGTTGATTCAGCGGCACGTGAAGAAATCGAAGCGATGGGGAAAAGCGAAGGCGATATTGAAGGAATTCGAGGAGAAATGTGCGACGCCGACGTGGAAGCTGAAGCAGGTTGCGGATGCAATGGCGGTGGAGATGCAAGCTGGTCTTGCTTCTGAAGGTGGTAGCAAACTCAAAATGCTCATCAGTTTCGTTGATAATCTTCCCACAGGGAATGAGGAAGGACTATTTTATGCATTGGACCTTGGAGGGACTAACTTTCGCGTATTACGTGTGCAACTCGGTGGCAAGGAAAATGGTGTTATTAGTCAAGAATTTACCGAGGTGTCTATTCCTCCAAATTTGATGGTTGGGACATCAAAAGAGCTCTTTGACTTTATTGCAGCAGAACTTGTAAAGTTTGTTAAAGAAGAAAAAGAAGATTTCCAGGTTCCTCCAGGTGGAAAGAGACAGCTAGGTTTTACCTTTTCCTTTCCTGTCATGCAAACTTCGATTTCTTCTGGGAACCTTATCAGGTGGACAAAAGGCTTCAGCATCGAGGATACAGTTGGTCAGGATGTTGTGGCTGAATTGAGAAATGCCATTGAAAGACAAGGTCTAGATATGCACATAACAGCTTTGGTCAATGATACAGTTGGGACATTAGCTGGAGGGCGATATACAAACAAAGATGTGTTTGCTGCTGTTATTTTAGGTACTGGAACAAATGCAGCGTATGTGGAGAATGCTCAAGCAATACCAAAATGGAACGGTGATTTGCCCGAGTCTGGAGAAATGGTTATCAACATGGAGTGGGGAAATTTCCGGTCATCGCACCTTCCATTAACTGAGTATGATACTGCATTAGATGCTGAAAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATCTCCGGAATGTACTTGGGAGAGATTGTTCGAAGAGTGCTTTTGAAAATGGCCGAAGAAGCTTGGTTTTTTGGTGAAACTGTTCCTTCAAAACTGAAAGTTCCATTCGTATTAAGGACACCTGACATGTCTGCCATGCATCACGACTCATCTGCTGATCTCAATGTGGTCAAAACCAAACTGACGAGCATTTTGGAGATCTCTGATACTTCCCTGCAAGTGCGAAAAGTGATTGTTGAGTTGTGCAATATTGTTGCTACTCGCGGTGCTCGTCTTGCTGCTGCTGGCATCTTAGGAATTCTGAAGAAGTTGGGAAAAGATACCACCGTCAGTGATGGTCAGAAGAATGTGATAGCCATGGATGGTGGATTGTACGAGCATTACACTGAATACAGCAAGTGCTTAGAAAATACACTAAATGAGTTGGTTGGTGAAGATGTATCAGGAAGCATTGTTGTTGAACACTCTAATGATGGTTCAGGAATCGGTGCTGCACTTCTTGCTGCTTCTCATTCTTGTTAG 1473 0.4433 MGKVVVCATVIGATAACAVATVLIQRHVKKSKRWGKAKAILKEFEEKCATPTWKLKQVADAMAVEMQAGLASEGGSKLKMLISFVDNLPTGNEEGLFYALDLGGTNFRVLRVQLGGKENGVISQEFTEVSIPPNLMVGTSKELFDFIAAELVKFVKEEKEDFQVPPGGKRQLGFTFSFPVMQTSISSGNLIRWTKGFSIEDTVGQDVVAELRNAIERQGLDMHITALVNDTVGTLAGGRYTNKDVFAAVILGTGTNAAYVENAQAIPKWNGDLPESGEMVINMEWGNFRSSHLPLTEYDTALDAESLNPGEQIFEKIISGMYLGEIVRRVLLKMAEEAWFFGETVPSKLKVPFVLRTPDMSAMHHDSSADLNVVKTKLTSILEISDTSLQVRKVIVELCNIVATRGARLAAAGILGILKKLGKDTTVSDGQKNVIAMDGGLYEHYTEYSKCLENTLNELVGEDVSGSIVVEHSNDGSGIGAALLAASHSC* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4546 490 SUPERFAMILY Actin-like ATPase domain 244 487 IPR043129 -
Psa4g4546 490 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Psa4g4546 490 PANTHER HEXOKINASE 1 489 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Psa4g4546 490 Gene3D - 83 485 - -
Psa4g4546 490 PANTHER HEXOKINASE-1 1 489 - -
Psa4g4546 490 ProSiteProfiles Hexokinase domain profile. 35 486 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Psa4g4546 490 Gene3D - 61 474 - -
Psa4g4546 490 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Psa4g4546 490 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Psa4g4546 490 SUPERFAMILY Actin-like ATPase domain 28 242 IPR043129 -
Psa4g4546 490 PRINTS Hexokinase family signature 98 114 - -
Psa4g4546 490 PRINTS Hexokinase family signature 172 197 - -
Psa4g4546 490 PRINTS Hexokinase family signature 224 240 - -
Psa4g4546 490 PRINTS Hexokinase family signature 247 261 - -
Psa4g4546 490 PRINTS Hexokinase family signature 312 334 - -
Psa4g4546 490 PRINTS Hexokinase family signature 395 417 - -
Psa4g4546 490 PRINTS Hexokinase family signature 471 487 - -
Psa4g4546 490 Pfam Hexokinase 247 486 IPR022673 GO:0005524|GO:0005975|GO:0016773
Psa4g4546 490 CDD NBD_sugar-kinase_HSP70_actin 99 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4546 Psa-Chr4 405140153 405145856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4546 K00844 - gmx:100783775 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4546 4 405140153 405145856 Psa4g4546 4 405140153 405145856 ECH