Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4527 ATGGGAGAAGATTTCAGACAATTTGGGATTGTATACCAGAAGTATTGTGAAGCTATGAGCAATCTCTCACTTGGGATAATGGAGCTTCTTGGTATGAGCTTAGGAGTTGGCAAGGAATATTTTAGAGAATTTTTTGAAGGAAATGAATCAGTAATGAGATTGAATTACTATCCACCGTGTAAAAATCCTGATTTAGCATTAGGAACTGGACCTCATTGTGACCCTACTTCACTAACCATTCTCCACCAAGATCAAGTTGAAGGTCTTCAAGTGCTTGTGGATGGAATATGGCACTCGGTTGTTCCTAAAGAAGATGCTTTTGTGGTCAACATTGGTGACACATTTATGGCTCTATCAAATGGAATGTTCAAGAGTTGCTTGCATAGAGCAATTGTAAATGACAAAATAGTGAGAAAATCACTTGCATTTTTTCTATGTCCAAATGAAGACAAAATAGTGACTCCTCCAAAAGAGCTTATTGACAAAGAGAATCCAAGGAAATATCCAAACTTCACATGGCCAAGTTTGCTTGAATTTACACAAAAACATTACAGGGCTGATGAAAGAACACTTGATGCTTTTTCAATGTGGTTACAAGAAAAAACAACTACTTAG 615 0.3675 MGEDFRQFGIVYQKYCEAMSNLSLGIMELLGMSLGVGKEYFREFFEGNESVMRLNYYPPCKNPDLALGTGPHCDPTSLTILHQDQVEGLQVLVDGIWHSVVPKEDAFVVNIGDTFMALSNGMFKSCLHRAIVNDKIVRKSLAFFLCPNEDKIVTPPKELIDKENPRKYPNFTWPSLLEFTQKHYRADERTLDAFSMWLQEKTTT* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4527 204 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 47 147 IPR005123 -
Psa4g4527 204 Pfam 2OG-Fe(II) oxygenase superfamily 49 147 IPR044861 -
Psa4g4527 204 SUPERFAMILY Clavaminate synthase-like 4 187 - -
Psa4g4527 204 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 199 - -
Psa4g4527 204 PANTHER GIBBERELLIN 20-OXIDASE 1 199 - -
Psa4g4527 204 Gene3D - 2 186 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4527 Psa-Chr4 404464350 404466145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4527 1 185 Glycosyltransferase AT5G59530 34.574 4.99e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4527 K05282 - gmx:100775693 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4527 4 404464350 404466145 Psa4g4527 4 404464350 404466145 ECH