Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4499 ATGGCTTCTTCGGAAGTCGATTCCCGTCTGAGTCAGCTTGTCGTTCCTGCACTCGACAAGATCATCAAGAACGCTTCCTGGCGAAAGCATGCGAAACTCGCTCACGAGTGCAAATCTGTCCTCGAGAGGCTCAGTCTCAACAACCAGCAGTTACCTCCCGATTCTCCCCCCGATGCTGAACCGGAAACGCCTGGTCCACTCCACGACGGAGGTTCGGTTGAGTACTCGCTCGCCGAATCGGAATCGATTCTCATTCCTCTCATCAATGCCGCAGGTTCCGGCTTCCTCAAGATCGCTGAACCTGCCGTGGATGCCATCCAGAAACTTATAGCACACGGATACCTCCGTGGCGAAGCAGATCCCGGCGGTACCGCGGGTGAGGCAAAGTTGCTTTCCAACATGATTGAATCGGTTTGCAAATGCCACAATTTCGGTGATGACGCAATGGAATTGCAGCTTCTCAAAACGCTCTTATCCGCGGTAACTTCGATTTCACTACGAATTCATGGTGATTGTTTGCTTCTGATAGTTAGAACATGTTACGATATATATCTTGTTAGTAAGAATATGGTGAATCAAACTACTGCAAAGGCTTCTTTGATTCAAATGTTAGTGATTGTGTTTAGGAGAATGGAAGCGGATTCTTCCACTGTTCCAATTCAGCCAATTGTGGTGGCTGAATTGATGGCTCCTGCAGAAAAATCTGACGTGGATAATTCCATGACACAGTTTGTGCAAGGGTTTATTACAAAGATAATGCAGGATATTGATGGAGTTTTGAATCCCGTTACACCTAATAGTAAGATTTCTATGTTAGGTGGACATGATGGGGCATTTGAGACCACAACAGTGGAGACTACAAACCCTACTGATTTGTTGGATTCTACCGATAAGGATATGTTGGATGCTAAGTATTGGGAGATTAGCATGTACAAGACGGCATTGGAGGGAAGGAAAGGGGAGTTGGTTGATGGGGAGTTGGTGGAAAGGGATGATGATTTGGAAGTTCAGATTGGGAATAAGTTGAGAAGGGATGCTTTTTTGGTGTTTAGAGCGCTTTGTAAATTGTCCATGAAGACACCCCCTAAGGAGGCATCTACGGATCCACAGTTGATGAAGGGGAAGATTATGGCTTTAGAGTTATTGAAGATTTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGTGAAAGGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCATTATTGAAGAACAGTGCTTCAACTCTTTTGATTGTTTTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTATCAAGATTTAGGCCTGGATTGAAAGCAGAAATTGGAGTGTTTTACCCTATGATTGTTCTTAGAGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATAGTTCTTCGATTTCTAGAAAAGCTCTGTGTTGATTCACAGATATTGGTTGACATTTTTATCAACTATGACTGTGATGTCAATTCGTCAAACATATTTGAGAGGATGGTTACTGGACTTCTTAAAACTGCTCAAGGTGTTCCTCCTGGTGTTACAACCACACTTTTGCCACCTCAGGAAGTGGTACTAAAACTTGAAGCCATGAAAAGCTTGGTTGGTGTTCTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGGATTCAAGATCCTCATTCAGCTAAGAAAGTTGAAGTAGCTGATAATGGCTATGATGCTAAAGGTTTCGTGATGGAAAATGGAAGTGGAGTAGACCTAGGTGAAGGATCTGATTCTCAGTCTGAAACCCCAAATGATGCATCTGATGTTTCAACTATCGAGCAGCGCCGGGCTTATAAACTGGAACTTCAGGAAGGTATATCACTTTTTAATAGGAAGCCTACCAAAGGAATTGAGTTCCTTATCAATGCCAACAAGGTGGGTGATTCACCGGAAGATATAGCTACTTTTCTTAAAGATGCATCTGGGTTGGACAAAATTTTGATTGGTGATTATCTGGGTGAAAGAGAAGAGTTATCCTTGAAGGTAATGCACGCCTATGTAGATTCCTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCCGGGTCTTTCTTCAAGGATTTAGACTACCTGGCGAGGCACAAAAGATTGACAGGATAATGGAAAAGTTTGCTGAACATTATTGGAAATGTAATCCTACGGCTTTTTCCAGTGCTGACACAGCATATGTCCTTGCCTATTCAGTGATAATGCTAAATACAGATGCTCACAATCCTATGGTGAAGGACAAGATGTCTGCTGATGACTTCATCAGAAACAATCGTGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACTTGAAGTCCTTGTTTGATAGAATTTCTAAAAATGAAATCAAAATGAAAGAAGATGACATGGCTTCCCAACAAAGGCAGGCTGTGAACCCAAATAAACTTTTAGGCTTGGATAGTATATTGAATATTGTGGTACGTAAGCGTGGGGACGAGAGTCATATGGAAACTAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAGAAAGCTCGCAAAACTGAGTCAGTTTATTATGCAGCTACAGATGCTGTAATCCTCAGATTCATGATAGAGGTGTGTTGGGCACCAATGTTAGCTGCTTTCAGTGTAGCTCTTGATCAAAGTGATGATGAGGTTGTAATATGTCTCTGTCTTAAAGGCTTCCGCTATGCTATTCATGTTACTTCCGTAATGTCTATGAAGACACATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCTCTGCATTCTCCTGCAGATATTAAGCAGAAGAATGTATATGCAATTAAGGAAATAATTACTATTGCTGATGAGGATGGAAATTATTTGCAAGAAGCTTGGGAGCATATCTTGACTTGCGTTTCCCGATTTGAGCATCTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCTACCTTTTTTGCCTTTCCTCAGAATGATTTGGAAAAAACAAAGCAAGCTAAATCAACCATTCTTCCTGTTTTGAAAAAGAAGGGACCTGGAAGGATGCTGTATGCAGCTGGCACATTGATGCGGGGTTCATACGATAGTGCTGGAATTGGCAATAGTGCTTCTGGAGCAGTCACATCAGAACAGGTGAATAACCTGGTTTCAAATTTGAATATGTTGGAACAAGTTGGGAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCTATAATAGATTTTGTTAAGGCCCTATGCAAGGTCTCTATGGAGGAACTGAGATCTCAATCTGATCCACGTGTTTTCAGCCTTACAAAGATGGTTGAGATTGCGCACTATAATATGAACCGCATTCGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTAATTTTTTTGTAACCATTGGATGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGGCAGTTGTCAATGAAATTCCTGGAGCGGGAAGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGGAAGAGTAATTCTGTTGAAATTAGAGAACTAATTATCAGATGTGTATCTCAAATGGTTCTATCTCGTGTAAACAATGTCAAATCGGGGTGGAAGAGCATGTTCATGGTATTCACTACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTACTTTCCATACATTACTGAGACTGAAACCACCACCTTCACTGACTGTGTTAATTGTCTAATTGCATTCACGAATAGTAGATTCAACCAAGAGATTAGCCTAAATGCCATTGGTTTTCTTCGTTTCTGTGCAACAAAGCTAGCTGAAGGAGACCTTGGATCATCATCCAGGAATAAAGATAAGGAAGTTTCTGGAAGGATTTCCTCAACTTCACCTCTAGAAGGAAAAGATGGGAATCAAGATAATGGAGAGGTGACCGGCAAGGATGATCATATCAATTTCTGGTTTCCTTTATTGTCAGGTCTATCGGAGCTTAGCTTTGACCCAAGGCCTGAGGTTAGGAAGAGTGCCCTAGATGTCCTGTTTGAAACACTACGCAAGCATGGCCATCACTTTTCACTACCTTTATGGGAAAGAATATTTGAGTCCGTCCTCTTTCCTATATTTGATTATGTTCGACATGCTATTGATCCTTCAGGGAGTAGTCCACAGGTCAATGAAGTAGAGACTAATGGCGAGCTTGATCAAGATGGCTGGCTTTATGAGACATGCACAGTGGCCCTCCAACTGGTTGTAGATCTTTTTGTCAACTTTTACCACGTTGTCAATCCTCTTTTAAGAAAGGTCCTGATGCTCCTAGTAAGCTTCATAAAGCGCCTTCATCAAAGCCTTGCTGGCATAGGTATTGCTGCATTTGTTCGATTGGTGAGTAATGCTGGAGAGCTACTTTCTGATGACAAGTGGTTAGAAGTGGTTTTGTCGATAAAAGAAGCAGCAAATGCAACACTCCCTGAATTTTCATTGCTCGAAAGTGAAGGCTTTGTGGCTAGAAATGGAGAACATGCTTCAGCAGTTGATGATGACAGAGATCTTGTTGAGTCTGGGTCACCAGATGATTTAGAAAGCCAAAGAGTTCGTCGTCTGTATGCTTATGTAACTGATGCGAAATGCCGAGCAGCTGTTCAGCTTTTATTGATTCAGGCTGTGTTGGAGGTCTACAACATGTTTCGGTCTCACCTTTCAGCGAAAACCATACTACTCCTATTTGATGCTTTGCATGGTGTATCATTACATGCGCACAACATTAACAACAATACTCTATTGCGTTCCAAGCTTCAAGAGTTTGGTTCTATGGCCCAAATGCAAGACCCTCCATTGTTACGTCTTGAAAACGAGTCATACCAAATATGCCTTACATTTTTACAGAATCTTGTTATTGACAAGCCTCCTAGTTATGAGGAAGTAGAGGTGGAATCTCATCTTGTCCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTGTGAAGAAAAATCAGAATCTTCTCTTAGGAGAAAGCCACATTGGTCAATTCCTTTAGGCTCCGTGAAGCGGAGAGAATTAGCTGCACGCGCGCCACTTGTTGTGGCTACTCTGCAGGCTATTTGTAGCTTGGATGATATTTCTTTTGAGAAGAACCTGTCTCATTTTTTCCCTCTTCTCACTAGTTTGGTAAGTTGTGAACATGGGTCAAATGAGGTCCAACTTGCCCTTTGTGATATGCTTACTTTATCAGTTGGCCCTGTTTTGTTACGGTCATGTTGA 5349 0.4158 MASSEVDSRLSQLVVPALDKIIKNASWRKHAKLAHECKSVLERLSLNNQQLPPDSPPDAEPETPGPLHDGGSVEYSLAESESILIPLINAAGSGFLKIAEPAVDAIQKLIAHGYLRGEADPGGTAGEAKLLSNMIESVCKCHNFGDDAMELQLLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLVSKNMVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMAPAEKSDVDNSMTQFVQGFITKIMQDIDGVLNPVTPNSKISMLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGELVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEASTDPQLMKGKIMALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRPGLKAEIGVFYPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVTGLLKTAQGVPPGVTTTLLPPQEVVLKLEAMKSLVGVLKSMGDWMNKQLRIQDPHSAKKVEVADNGYDAKGFVMENGSGVDLGEGSDSQSETPNDASDVSTIEQRRAYKLELQEGISLFNRKPTKGIEFLINANKVGDSPEDIATFLKDASGLDKILIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAEHYWKCNPTAFSSADTAYVLAYSVIMLNTDAHNPMVKDKMSADDFIRNNRGIDDGKDLPEEYLKSLFDRISKNEIKMKEDDMASQQRQAVNPNKLLGLDSILNIVVRKRGDESHMETSDDLIRHMQEQFKEKARKTESVYYAATDAVILRFMIEVCWAPMLAAFSVALDQSDDEVVICLCLKGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVYAIKEIITIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDLEKTKQAKSTILPVLKKKGPGRMLYAAGTLMRGSYDSAGIGNSASGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSQSDPRVFSLTKMVEIAHYNMNRIRLVWSSIWHVLSNFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNSVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNQEISLNAIGFLRFCATKLAEGDLGSSSRNKDKEVSGRISSTSPLEGKDGNQDNGEVTGKDDHINFWFPLLSGLSELSFDPRPEVRKSALDVLFETLRKHGHHFSLPLWERIFESVLFPIFDYVRHAIDPSGSSPQVNEVETNGELDQDGWLYETCTVALQLVVDLFVNFYHVVNPLLRKVLMLLVSFIKRLHQSLAGIGIAAFVRLVSNAGELLSDDKWLEVVLSIKEAANATLPEFSLLESEGFVARNGEHASAVDDDRDLVESGSPDDLESQRVRRLYAYVTDAKCRAAVQLLLIQAVLEVYNMFRSHLSAKTILLLFDALHGVSLHAHNINNNTLLRSKLQEFGSMAQMQDPPLLRLENESYQICLTFLQNLVIDKPPSYEEVEVESHLVRLCQEVLEFYIEVAGCEEKSESSLRRKPHWSIPLGSVKRRELAARAPLVVATLQAICSLDDISFEKNLSHFFPLLTSLVSCEHGSNEVQLALCDMLTLSVGPVLLRSC* 1783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4499 1782 MobiDBLite consensus disorder prediction 1307 1333 - -
Psa4g4499 1782 SUPERFAMILY Sec7 domain 611 802 IPR035999 GO:0005085|GO:0032012
Psa4g4499 1782 Pfam BIG2 C-terminal domain 1573 1770 IPR046455 -
Psa4g4499 1782 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1775 - -
Psa4g4499 1782 Gene3D - 689 809 IPR023394 -
Psa4g4499 1782 Gene3D - 607 688 - -
Psa4g4499 1782 Pfam C-terminal region of Mon2 protein 1342 1407 IPR032817 -
Psa4g4499 1782 CDD Sec7 614 796 IPR000904 GO:0005085|GO:0032012
Psa4g4499 1782 SMART sec7_5 611 796 IPR000904 GO:0005085|GO:0032012
Psa4g4499 1782 Pfam Sec7 domain 615 796 IPR000904 GO:0005085|GO:0032012
Psa4g4499 1782 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 10 1775 - -
Psa4g4499 1782 Pfam Dimerisation and cyclophilin-binding domain of Mon2 7 214 IPR032629 -
Psa4g4499 1782 Pfam Domain of unknown function (DUF1981) 1165 1247 IPR015403 -
Psa4g4499 1782 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 343 501 IPR032691 -
Psa4g4499 1782 SUPERFAMILY ARM repeat 397 1399 IPR016024 -
Psa4g4499 1782 ProSiteProfiles SEC7 domain profile. 607 794 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4499 Psa-Chr4 400672153 400687500 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4499 K18442 - gmx:100798955 3041.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2673 3 223762064 223775266 Psa4g4499 4 400672153 400687500 PCT