Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4446 ATGAAAGGGGCAATTGATGAGGGAAAGGAGATAAGTCCAATGTTCCCTAGGTTGCATGTGAAGGATGCAGAGAAAGGAGGACCAAAAGCGCCTCCAAGGAATAAAATGGCTCTATATGAACAATTTAGCATCCCTTCACAAAGTTTTGCAGCTGGAGGACCAGGTTCAGGATCCTTGTTTTCTCTCCCTTTAAGAAACTGCACAGTTCCTACATCATCAAGCCATCTTGGTTATAATCAAAGCATCAACTTCTGCAGCTCCAAATCCAATGCAATTTCTATTCTATCTGAGAAGACTCAAGCCTATAATTCAAGAAAGATTAACTTAACAAAGTTGACAGTGAGTCATGACTTAGAACACATGAAACCGGCAAAACAAATTACCAAAGTTCAGCAAGATAATTACATCAATAGTAGTAAGAGTTCTCTTAAAACACTTGATGGTGAAGATGCTTTTATAACTCCTAGTTCTGTTCATCTGAAAAGTTCATTCTATGGTGGCGTCGTCCAAAATGAAAAAGATGAAGACAAACTTGCTCGCTGCAATTTGAGCTTTTCGTTTAAAAGTCTAAATTCATTTAGAAAGGTGATGAATTCATCTGAAGCCATAGATCTGAAATCATCACAATATGGGAAGAACCGGATGGAAGAGCATAAAGATGCGAGTCAAATTGATCAAAAGGCAAAGGAAAAATCTCCTCACTCATTAAATGGTTTTGATGACACAACAAATGAATCGTCAAACTCATCTGCTAAATATACGAATTCTAAATCAATGAAAGAAGAAATTAAAAATATTTCAGTAGATAGCTTGAAAGCATTGCAAGGTAGCAATGGTCATAGACATGAAGATCATGCAGCTTTTGTAGACAAAAACAAATTCAGAGATCATTGCATGGAGAAGCCAACAATGAGTGATGTCCAAAAATGTTCCGGCGAGTTAGAAATCGGTAGACGGTCTTTACATGGAAAGAGAGAGAGGAGTAGAGATGAGGAGACTAGTAGAAATTATGATGCCTTGAATAAATCAAGCTCAGATTGTAGGTTTGGTGTGGATATCATCCCTGACGATGTCGTAGGACTAATAGGTGAAAAACAATTTTGGAGAACAAGAAAAACTATCATCAATCAACAGAGAAACTTCTTCATGCAAGTGTTTGAGTTACATAGACTTATAAAGGTCCAAAGATTAATTGCAGGATCACCTAATCTCTTGTTTGAAGACAACCTTGTACTTAACAAACCACCAACAAAAACATCCTCCCCCGAGAAACTACAATCTGACTTTATCAGTGAACAACCATTGACCGTTTTTAAACATGACAGCAAGTCCGAGAAAGCCTCTACTTCCGAGGATGTTAAAAACAGTGCAGTTGGGAACATTCCCTTTCCTTGTGTGAACAACATAAGCAAAGAACATAACCGGCTTTCATATTACGGCAATCATCATTTGGGAAATCTTACACTAGTCTCTGCAGATAAAAGTTCAAGTTCCATTTGCCTATCCAAACAATCTTCAAGCATTGTCTACCCACCGCCACCAAACAATGGTTAG 1554 0.3784 MKGAIDEGKEISPMFPRLHVKDAEKGGPKAPPRNKMALYEQFSIPSQSFAAGGPGSGSLFSLPLRNCTVPTSSSHLGYNQSINFCSSKSNAISILSEKTQAYNSRKINLTKLTVSHDLEHMKPAKQITKVQQDNYINSSKSSLKTLDGEDAFITPSSVHLKSSFYGGVVQNEKDEDKLARCNLSFSFKSLNSFRKVMNSSEAIDLKSSQYGKNRMEEHKDASQIDQKAKEKSPHSLNGFDDTTNESSNSSAKYTNSKSMKEEIKNISVDSLKALQGSNGHRHEDHAAFVDKNKFRDHCMEKPTMSDVQKCSGELEIGRRSLHGKRERSRDEETSRNYDALNKSSSDCRFGVDIIPDDVVGLIGEKQFWRTRKTIINQQRNFFMQVFELHRLIKVQRLIAGSPNLLFEDNLVLNKPPTKTSSPEKLQSDFISEQPLTVFKHDSKSEKASTSEDVKNSAVGNIPFPCVNNISKEHNRLSYYGNHHLGNLTLVSADKSSSSICLSKQSSSIVYPPPPNNG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4446 517 MobiDBLite consensus disorder prediction 318 337 - -
Psa4g4446 517 PANTHER PROTEIN EARLY FLOWERING 3 1 516 IPR039319 GO:2000028
Psa4g4446 517 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 516 - -
Psa4g4446 517 MobiDBLite consensus disorder prediction 210 236 - -
Psa4g4446 517 MobiDBLite consensus disorder prediction 207 258 - -
Psa4g4446 517 MobiDBLite consensus disorder prediction 1 34 - -
Psa4g4446 517 MobiDBLite consensus disorder prediction 237 256 - -
Psa4g4446 517 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4446 Psa-Chr4 394729494 394734096 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4446 K12125 - gmx:102663657 548.895