Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4443 ATGCTTCCTACTAGATTGGAGGAAGGGAAGGACCCTGCTGCAATAGCTACATTAAGAGTCACACACTCTAGGCAATATCCTTTGAGGCTTTTGCAGTTTTTCTTACTCTTTCTGATTATTGGAATTGGTGGTTCATTTCTTAGTATGTATATGGTTAGGCATTTTGGTATTCATAATGTGGCGTTTGTTCAATCGTCATCGCGTAAGCCTTGTTTTCAGAGGCCGGCGGTTGTGGAGAATTGGTTTAAGGCTCCTTCTAGTTTGTTGCATAGTATGAATGATGCTGAACTCTTCTGGAGAGCTTCTTTTTCTCCAAGGATTCAGAGTTATCCGTTTAAAAGAACTCCGAAAATTGCGTTTATGTTCTTGACTAAGGGACCTTTGCCAATGGCACCACTTTGGGAGAGGTTCTTTAAGGGACATGAGAAGCTTTATTCCATTTATGTTCATTCGTTGCCGTCTTACAATGCTGATTTTCCGCCATCGTCGGTTTTTTATCGCAGACAGATCCCTAGCCAGGTGGCGGAATGGGGAATGATGAGTATGTGTGACGCCGAAAGAAGGCTTCTAGCAAATGCGTTGCTTGACATCTCGAATGAATGGTTTGTTCTTCTTTCAGAGGCCTGCATCCCTCTCCATAACTTCAGCATCGTATACCGATACCTGTCACGGTCAAGGTATAGCTTTATGGGCGCATTTGATGAGCCTGGTCCTTACGGAAGAGGACGCTACGAAGAAAACATGAAACCTGAAATCAACCTGAGCGACTGGCGTAAAGGGTCTCAGTGGTTCGAAATTAACCGCGAACTTGCAGTTAGGGTAGTTGAAGACAGTACTTACTATCCAAAACTCAGAGACTTCTGCGTCCCGCACAAATGCTATGTTGATGAACATTATTTCCAGACAATGTTAACCATTAATACTCCTCAACTTCTGGCGAATCGGAGCGTCACTTACGTGGATTGGTCAAGAGGCGGTGCTCACCCGGCTACATTTGGGAAGAATGACATCAAAGAGGAATTCTTCAAGAAAATATTGCAGAATCAGACATGTCTTTATAATAACCAGCCAACATCACTTTGTTTCTTATTTGCTAGAAAATTTGCACCTAATGCTTTAGGTCCTCTGTTAGATTTAGCGCCGAAAGTTCTAGGAATAGGAAATTCGTCTCACTTCTGA 1179 0.4292 MLPTRLEEGKDPAAIATLRVTHSRQYPLRLLQFFLLFLIIGIGGSFLSMYMVRHFGIHNVAFVQSSSRKPCFQRPAVVENWFKAPSSLLHSMNDAELFWRASFSPRIQSYPFKRTPKIAFMFLTKGPLPMAPLWERFFKGHEKLYSIYVHSLPSYNADFPPSSVFYRRQIPSQVAEWGMMSMCDAERRLLANALLDISNEWFVLLSEACIPLHNFSIVYRYLSRSRYSFMGAFDEPGPYGRGRYEENMKPEINLSDWRKGSQWFEINRELAVRVVEDSTYYPKLRDFCVPHKCYVDEHYFQTMLTINTPQLLANRSVTYVDWSRGGAHPATFGKNDIKEEFFKKILQNQTCLYNNQPTSLCFLFARKFAPNALGPLLDLAPKVLGIGNSSHF* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4443 392 Pfam Core-2/I-Branching enzyme 118 345 IPR003406 GO:0016020|GO:0016757
Psa4g4443 392 PANTHER - 5 384 - -
Psa4g4443 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 384 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4443 Psa-Chr4 394603256 394605691 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4443 - - mtr:MTR_8g015500 698.353