Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4442 ATGTCTTGTTCTTCCTTCAAACTCAACAGTTTCCATTTTTGTATCATCATATTCATTTTACATGTCTTTGCTGCAACACCCATTTTGTCTGATAAATTCAACAGCTTTCTAGACAGTGCCAAGAGTCCTGAGGTTTTTGATTGGATGGTCGGTATCAGAAGAAAGATTCATGAGAATCCTGAACTGTGTTATGAAGAATTTGAGACAAGTGAACGGATAAGATCAGAATTGGATAAAATGGGTATACCTTATAAACATCCAGTTGCAATCACTGTTGCAATCACTGGTGTCATTGGCTTCATAGGAACTGGATTGCCTCCTTTTGTTGCTTTAAGAGCTGATATGGATGCTCTTCCTATGCAGGAAATGGTGGAGTGGGAGCATAAGAGTAAAGTAGCTGGAAAAATGCATGCTTGTGGTCATGATGCTCATGTTACAATGCTACTTGGTGCTGCAAAGATTCTCAAACACCATGAAAAAGACATACAAGGAACTATTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAAATCTTAGATGCTGGTGCATTAGAAAATGTTACAGCTATCTTTGGATTGCATATTGCTCCTGAATTACCAATAGGTGAAGTGGCCTCTAGGTCTGGTCCAATAATGGCGGGAAGTGGCCGCTTTGAAGCAAAAATAAGTGGAAAAGGAGGTCATGCTGCTATTCCTCAACAGGCTATAGACCCAATATTGGCAGCTTCCAATGTGATTATTAGCTTACAACACCTTGTTTCGCGCGAGGCTGATCCTCTCGACTCCCAGCAAGAGACATCATTATGTTCCGCGAAGTGTCTGAATAATATGACTTGGAGTCATCGTCTATGA 867 0.4118 MSCSSFKLNSFHFCIIIFILHVFAATPILSDKFNSFLDSAKSPEVFDWMVGIRRKIHENPELCYEEFETSERIRSELDKMGIPYKHPVAITVAITGVIGFIGTGLPPFVALRADMDALPMQEMVEWEHKSKVAGKMHACGHDAHVTMLLGAAKILKHHEKDIQGTIVLVFQPAEEGGGGAKKILDAGALENVTAIFGLHIAPELPIGEVASRSGPIMAGSGRFEAKISGKGGHAAIPQQAIDPILAASNVIISLQHLVSREADPLDSQQETSLCSAKCLNNMTWSHRL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4442 288 TIGRFAM amidohydrolases: amidohydrolase 49 267 IPR017439 GO:0016787
Psa4g4442 288 PANTHER PEPTIDASE M20 FAMILY MEMBER 13 277 IPR017439 GO:0016787
Psa4g4442 288 Pfam Peptidase family M20/M25/M40 110 210 IPR002933 GO:0016787
Psa4g4442 288 PANTHER AUXIN CONJUGATE HYDROLASE 13 277 - -
Psa4g4442 288 SUPERFAMILY Zn-dependent exopeptidases 44 241 - -
Psa4g4442 288 Gene3D - 218 268 - -
Psa4g4442 288 Gene3D Zn peptidases 49 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4442 Psa-Chr4 394600601 394603128 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4442 K21604 K14664 gmx:100789077 413.305