Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4362 ATGGCTTCAATTCATACAGTTAAATTCTTACTGTTCTTTGTTCCATGGTTCTGGACCTGCAACTTTCTACCTCTTTCTCAAGGGAAATATGATTACCCTTATATAAAAAAAGCGAGTTCATTCTCTTCACCGTCAATTTCAGATACATCATTGAACAAAGCTTATGATTATATAATAGTTGGAGGTGGAGGTGCAGGGTGTCCTTTAGCAGCAACACTTTCACAGAATTTCAGTGTGTTATTACTTGAAAGAGGTGGTGTACCATTCACTAACCCAAATGTAACATTTCTTGAAAATTTTCACATTACCTTGGCAGATCTTTCATCAACTTCAGCTTCACAGTACTTTGTTTCAACTGATGGAGTTTTTAATGCAAGAGGAAGAGTTTTAGGTGGTGGTACTTCTATTAATGCTGGTTTCTATACTAGAGCTAGCTCAAGGTTTATAAGTAAGGTAGGGTGGGATGCAAAGCTTGTAAATGAGTCATACCCTTGGGTTGAGAAGCAGATTGTTCATCGTCCAAAGTTTTCGCCTTTTCAAAGAGCAGTGAGGGACAGCCTTATAGACACTGGAGTCTCTCCTTTTAATGGCTTCACTTATGATCATATTTATGGAACCAAAGTTGGTGGAACCATTTTCGACAGATTCGGTCGCCGTCACACAGCTGCTGAACTTCTTGCTTCTGGAAACCCTGAAAAACTTACTGTTTTGGTCCATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGTAAAAACCCAAAAGCTGTAGGGGTTATTTTCAATGATGAAAATGGGAAACAACATGAAGCAATGTTGGGAAATGATAAGCAAAGTGAAGTGATATTGTCTAGTGGAGCAATTGGTTCACCTCAAATGCTATTGCTAAGTGGAATTGGGCCTAAAGCTGAACTCGAAAACTTGAACATCTCGGTGGTTCTCGACAACCATTTCGTTGGAAAGGGAATGATAGATAATCCAATGAATGCACTTTATGTTCCTTCTAATAGGCCAGTTCATCAGTCACTCATTCAAACTGTAGGTATCACCAAGAAAGGCATATACATTGAGGCTAGTAGTGGATTTAGTCAGTCCAACAGCAGCATTCACTGCCATCACGGTATCATGTCCGCTGAGATTGGACAACTTTCCACAATTCCTCCTAAGCAAAGATCAATAGAAGCTATTCAAGCTTACGCGAAGAACAAACGAGACATACCGGTTGAAGCATTCAAGGGAGGCTTTGTCTTGTCAAAAGTCAGCAGTGCTTGGTCAGTCGGTGAGCTCAAGTTGATCAACACCAATGTGAATGACAATCCTTCTATTACCTTCAACTACTTCAGTCATCCACACGATCTGAAGCGCTGCGTCGAAGGGATCAGAATGGCACTTAAAGTAGTCCAGTCGGAACACTTCACAAACTACACATTGTGTAAGAAAAAAACTGCTGAGAAACTTCTTAACCTTAGTGTGGAGGCAAATGTCAACTTCATACCGAAAAATGCCAATGACACAACATCCCTGGAGCAGTTCTGCAAAGACACTATAATCACGATTTGGCATTACCATGGTGGATGTCATGTCGGGAAGGTAGTTAGTCCTGACTATAAGGTTCTTGATGTTGATAGACTTCGAGTTGTCGATGGTTCGACATTTACAGAATCACCAGGAACAAATCCACAAGCCACTGTCATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGAGATAGGTTGGGAAAATTGGCTGGTATATAA 1761 0.406 MASIHTVKFLLFFVPWFWTCNFLPLSQGKYDYPYIKKASSFSSPSISDTSLNKAYDYIIVGGGGAGCPLAATLSQNFSVLLLERGGVPFTNPNVTFLENFHITLADLSSTSASQYFVSTDGVFNARGRVLGGGTSINAGFYTRASSRFISKVGWDAKLVNESYPWVEKQIVHRPKFSPFQRAVRDSLIDTGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASGNPEKLTVLVHATVQKIVFDTTGKNPKAVGVIFNDENGKQHEAMLGNDKQSEVILSSGAIGSPQMLLLSGIGPKAELENLNISVVLDNHFVGKGMIDNPMNALYVPSNRPVHQSLIQTVGITKKGIYIEASSGFSQSNSSIHCHHGIMSAEIGQLSTIPPKQRSIEAIQAYAKNKRDIPVEAFKGGFVLSKVSSAWSVGELKLINTNVNDNPSITFNYFSHPHDLKRCVEGIRMALKVVQSEHFTNYTLCKKKTAEKLLNLSVEANVNFIPKNANDTTSLEQFCKDTIITIWHYHGGCHVGKVVSPDYKVLDVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRDRLGKLAGI* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4362 586 SUPERFAMILY FAD/NAD(P)-binding domain 49 578 IPR036188 -
Psa4g4362 586 ProSitePatterns GMC oxidoreductases signature 2. 286 300 IPR000172 GO:0016614|GO:0050660
Psa4g4362 586 Gene3D - 55 568 IPR036188 -
Psa4g4362 586 PIRSF Alcohol_oxidase 35 585 IPR012132 GO:0050660
Psa4g4362 586 Gene3D - 172 518 - -
Psa4g4362 586 PANTHER OSJNBA0019K04.7 PROTEIN 2 586 - -
Psa4g4362 586 Pfam GMC oxidoreductase 55 327 IPR000172 GO:0016614|GO:0050660
Psa4g4362 586 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 586 - -
Psa4g4362 586 SUPERFAMILY FAD-linked reductases, C-terminal domain 323 525 - -
Psa4g4362 586 Pfam GMC oxidoreductase 425 569 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4362 Psa-Chr4 385021189 385027518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4362 3 581 Miscellaneous Gene Families AT3G56060 48.027 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4362 K15403 - gmx:100779461 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4362 4 385021189 385027518 Psa4g4362 4 385021189 385027518 ECH