Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4339 ATGGTGGTTACATCTATTCGTCTTCTTCCTTCTTCTCTCACTTCTCTCGTTCAACCTCGTTCTCCATATTCATGGCGTTGGCGTTCTCCTTCTTCCATCTCATTTCCGCTTTCTCCCATCCACTCCATTTCCTCTAATGGAGTTGGTGATGTTGAATTACCTGTTGATCAATCACAAGTTATTTTCATTGGGACTGGAACTAGTGAAGGGATTCCAAGAGTTAGTTGCTTGACTAATCCTTCAACTAAATGTCCGGTATGTTTAAAAGCTGCTAAACCGGGTGATAAGAATAGGAGACTTAACACGAGCATCCTCATTCGCCACCCAAACTCCACAGGAACACATAATATTCTAATAGATGCTGGAAAGTTTTTCTATCACAGCGCTCTCCGGTGGTTCCCTGAATTTGGGATAAGAACACTTGATGCAGTTATTATTACTCATTCCCATGCTGATGCAATTGGAGGTCTTGATGATCTTAGAGACTGGACTAACAATGTTCAGCCTTCTATTCCAATATATGTTGCCAAGCGTGACTTTGAGGTTATGAAGAAGACCCATTATTACTTAGTAGATACAAGCGTAATCACACCTGGTGCTGCAGTCTCAGCGTTGCAATTCAAAAGCATATCTGAAGAACCGTTTTTTGTGCATGGATTGAAGTTCACCCCACTACCAGTGTGGCACGGTCAAGGTTATCGGTCCCTTGGTTTCCGTTTTGGTAATATATGTTACATAAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTGAAGGGCTGTGAACTTCTAATCATGGATGCTTTGAGGCCTGATCGCTCTTCAGCTACACATTTTGGACTTCCAAGGGCCTTAGAGGAAGTGCGAAAAATTCAACCCAAAAGGACACTTTTTACTGGAATGATGCATCTGATGGATCATGAAGAAGTGAATGGCTACCTTACAAAACTATTGGAGTCTGAGGGCCTTGATGCACAACTGAGCTATGACGGGCTTTGTATACCAGTCAGGCTCTAA 1023 0.4223 MVVTSIRLLPSSLTSLVQPRSPYSWRWRSPSSISFPLSPIHSISSNGVGDVELPVDQSQVIFIGTGTSEGIPRVSCLTNPSTKCPVCLKAAKPGDKNRRLNTSILIRHPNSTGTHNILIDAGKFFYHSALRWFPEFGIRTLDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAKRDFEVMKKTHYYLVDTSVITPGAAVSALQFKSISEEPFFVHGLKFTPLPVWHGQGYRSLGFRFGNICYISDVSEIPEETYPLLKGCELLIMDALRPDRSSATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEEVNGYLTKLLESEGLDAQLSYDGLCIPVRL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4339 340 CDD metallo-hydrolase-like_MBL-fold 59 270 - -
Psa4g4339 340 SMART Lactamase_B_5a 100 303 IPR001279 -
Psa4g4339 340 SUPERFAMILY Metallo-hydrolase/oxidoreductase 59 338 IPR036866 -
Psa4g4339 340 PANTHER HYDROLASE C777.06C-RELATED-RELATED 38 340 - -
Psa4g4339 340 Gene3D - 54 339 IPR036866 -
Psa4g4339 340 PANTHER OS09G0363800 PROTEIN 38 340 - -
Psa4g4339 340 Pfam Beta-lactamase superfamily domain 115 301 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4339 Psa-Chr4 382620348 382625629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4339 - - mtr:MTR_8g017270 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4339 4 382620348 382625629 Psa4g4339 4 382620348 382625629 ECH