Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4322 ATGGCATCCAACGGCTTGTGTCCTTCGATTAAAAACATTCTTCTTTTAGATTCTGAAGGGAAGCGTGTAGCAGTCAAGTATTACTCAGATGACTGGCCAACGAACAGTTCAAAATTAGCTTTTGAGAAGTTTGTGTTCACCAAGACTGTTAAGACAAATGCAAGGACAGAAGCTGAGATAACACTGCTTGAGAACAATATCATCGTTTACAAATTTGTGCAAGACCTGCATTTCTTTGTCACTGGTGGTGATGATGAAAATGAGCTCATTTTGGCTTCAGTTCTTCAAGGTTTCTTCGATGCAGTCACCCTTTTGCTGAGGAGCAATGTTGACAAAGGCGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGTCTTGACGAGATTGTTGATGGAGGGATTATACTTGAAACAAATGGACCTCTTATAGCCGAAAAAGTGACCTCCCATAACATGGATGCTGATGCCCCCTTATCAGAGCAGACACTAACTCAGGCATGGGCTACAGCCAGAGACACTTTCACAAGAACTCTTCTAACATGA 543 0.418 MASNGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEAEITLLENNIIVYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKGEALENLDLILLCLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLLT* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4322 180 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 5 180 - -
Psa4g4322 180 Gene3D - 2 150 - -
Psa4g4322 180 PANTHER ZETA-COAT PROTEIN 5 180 IPR039652 GO:0006890|GO:0030126
Psa4g4322 180 CDD Zeta-COP 11 146 - -
Psa4g4322 180 SUPERFAMILY SNARE-like 10 150 IPR011012 -
Psa4g4322 180 Pfam Clathrin adaptor complex small chain 10 151 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4322 Psa-Chr4 381516119 381519107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4322 K20472 - gmx:100775726 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4322 4 381516119 381519107 Psa4g4322 4 381516119 381519107 ECH