Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4264 ATGGCTTCTCATTTACTCAATCACTCCAAAAAGCTGAGAAATGCTTCGAGCTTGATACAGCATGACCGTGCACTTTTGGTTCGTTGGTTTTGCAGCGATGTTCAATCCTTATCTATCAACCGAAATCGTGATATGTTGAAAACCCGGATACAAGATTATGAGTCTTCAGCAAGAAACCATGTCTCTGAATCTGCCCCAAATTTTACTAAACCTTCATTTGGTGTACAGAAGAGAAACATGTCCACCATGAAAAGGGGTTACATGAGGGAGTCCTTGTTGAACGGAGAGATTTTACAAAATTCACAGGTTCTGTCAAGGAGGAACTATTCATCAGCTTCAGATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCGCCTACAATGACAGAGGGTAACATTGCAAGATGGTTGAAGAAAGAAGGGGATAAAGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACTGTTGAAATGGAGTGCATGGAGGATGGTTTTTTGGCCAAAATAGTTCGTCAGGAGGGGGAAAAAGAAATTCAAGTTGGCGAGGTAATTGCCATCACTGTTGAAGATGAGGGGGACATTGCAAAGTTTAAAGATTACAAACCTTCAGCATCTAAATCTAGTGACCCCCCTGCCAAAGAAACACCTGCCCCACCTCCCCCAAAGAAAGAAGTGGCAGAGGAGCCTGCCCGAGAACCTGAGCCAAAGGTTTCCAAGCCTAGTGCACCACCTTCATCTGGAGATCGGATATTTGCTAGTCCCCTTGCTAGAAAGTTGGCTGAAGAGAAAAATGTGACTCTCTCCAGCATTAAAGGAACAGGGCCTGATGGGCTCATTGTGAAGGGTGACATTGATGATCACTTGGCTTCTAGTGGTGTTAAAGAAGTTTCAGCACCCTCAAAGGCCAAGGCTGCAACAGATGTAGCTTTGGATTATACCGACATTCCTATGTCTCAGATAAGAAAGATCACGGCTTCACGTTTGTTGCTATCAAAACAAACTATTCCTCATTACTATTTAACAGTAGATACATGTGTTGACAAACTAATGAGTTTGCGTTCCCAACTCAATTCGTTACAGGAAGCCTCTGGCGGTGCCCGTATATCAGTAAATGACCTTGTAATCAAGGCTGCTGCTTTGGCTCTCCGTAAAGTTCCTCAGTGTAACAGTTCATGGACAAATGATTATATTCGCCAGTATCATAATGTGAATATTAATGTTGCTGTGCAGACTGATCATGGACTCTTTGTTCCGGTCGTCAGGGACGCAGACAAGAAAGGTCTCTCTAAAATAGGCGAAGAGGTCAAACAATTGGCTAAGAAAGCTAAAGAAAACAGCTTGAAACCCCAAGATTACGAGGGAGGTACATTTACAGTGTCTAACTTGGGAGGGCCATTTGGAGTCAAACAGTTCTGTGCCATTGTCAATCCTCCTCAATCAGGCATTCTTGCAGTTGGATCTGCTGAGAGGAGGGTTGTTCCAGGTTCAGGTGCTGAGGAATTCAAATTTGCTTCCTTCATGGCTGTAACCCTCAGCTGTGATCATCGTGTAATAGATGGGGCAATTGGTGCAGAATGGCTAAAAGCATTCAAAGGCTACATTGAGAATCCAGAAACCATGTTGTTGTAA 1647 0.4372 MASHLLNHSKKLRNASSLIQHDRALLVRWFCSDVQSLSINRNRDMLKTRIQDYESSARNHVSESAPNFTKPSFGVQKRNMSTMKRGYMRESLLNGEILQNSQVLSRRNYSSASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEDGFLAKIVRQEGEKEIQVGEVIAITVEDEGDIAKFKDYKPSASKSSDPPAKETPAPPPPKKEVAEEPAREPEPKVSKPSAPPSSGDRIFASPLARKLAEEKNVTLSSIKGTGPDGLIVKGDIDDHLASSGVKEVSAPSKAKAATDVALDYTDIPMSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMSLRSQLNSLQEASGGARISVNDLVIKAAALALRKVPQCNSSWTNDYIRQYHNVNINVAVQTDHGLFVPVVRDADKKGLSKIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIVNPPQSGILAVGSAERRVVPGSGAEEFKFASFMAVTLSCDHRVIDGAIGAEWLKAFKGYIENPETMLL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4264 548 MobiDBLite consensus disorder prediction 207 254 - -
Psa4g4264 548 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 317 548 IPR001078 GO:0016746
Psa4g4264 548 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 3 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 49 548 - -
Psa4g4264 548 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 250 295 IPR036625 GO:0016746
Psa4g4264 548 ProSiteProfiles Biotinyl/lipoyl domain profile. 118 194 IPR000089 -
Psa4g4264 548 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 120 548 IPR006257 GO:0004742|GO:0006090|GO:0045254
Psa4g4264 548 Pfam Biotin-requiring enzyme 120 192 IPR000089 -
Psa4g4264 548 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 257 294 IPR004167 GO:0016746
Psa4g4264 548 CDD lipoyl_domain 119 192 - -
Psa4g4264 548 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 143 172 IPR003016 -
Psa4g4264 548 Gene3D - 251 299 IPR036625 GO:0016746
Psa4g4264 548 SUPERFAMILY CoA-dependent acyltransferases 317 548 - -
Psa4g4264 548 MobiDBLite consensus disorder prediction 226 241 - -
Psa4g4264 548 Gene3D - 113 218 - -
Psa4g4264 548 PANTHER DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 49 548 - -
Psa4g4264 548 SUPERFAMILY Single hybrid motif 117 212 IPR011053 -
Psa4g4264 548 Pfam e3 binding domain 256 290 IPR004167 GO:0016746
Psa4g4264 548 Gene3D - 301 546 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4264 Psa-Chr4 376176344 376183277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4264 2 548 Acyl Lipid Metabolism Gene Families AT1G54220 67.459 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4264 K00627 - gmx:100778218 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4264 4 376176344 376183277 Psa4g4264 4 376176344 376183277 ECH