Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4236 ATGTCTTCGATCCGAAGAAGAAAAGGGTCGGAACCAGAAAAGGGTCCTAGTGAAAATTCAGAACCAAAAATTCAGAAGAAAGAAGGAGAAGAAGAAGAAAGAGAAGATGATGATAATGATAAAAACAAAGAGAATAGGAATAAGAATAAGAACGGGGTTGATGTGTTGAAGAAGAAGAAGAGTAAGTGGTCTTGTATTGATAGTTGTTGTTGGTTTGTCGGTTGCATTTGCACGTTATGGTGGTTTTTGTTGTTTATGTACAATGTGATGCCTGCTTCGTTTCCTCAGTATGTGACTGAAGCTATTACTGGTCCTATGCCTGATCCACCTGGTCTTAAACTCAAGAAGGAAGGGTTGAGGGTGAAGCACCCGGTGGTTTTTGTTCCGGGGATTGTTACCGGTGGGCTTGAACTTTGGGAGGGTCATCAGTGTGCTGAAGGGTTGTTTAGGAAGAGATTGTGGGGTGGTACTTTTGGAGAAGTTTACAAAAGACCTTCATGTTGGGTGGAACACATGTCATTGGACAATGAATCAGGATTGGATCCACCCGGCATAAGAGTCCGACCTGTTACTGGACTTGTAGCTGCTGACTACTTTGCCGCAGGATACTTTGTTTGGGCTGTTTTAATTGCTAACTTGGCACGCATTGGTTATGAAGAAAAGACTATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACCGAGGTGCGGGATCAAACACTAAGTCAGATAAAAAGCAACATAGAACTTATGGTTTCAACTAATGGTGGAAATAAGGCGGTTATTATTCCACATTCGATGGGGGTTTTGTATTTTCTTCATTTCTTGAAATGGGTTGAAGCACCAGCTCCAATGGGGGGTGGAGGAGGACCAGATTGGTGTTCCAAATATATTAAGGCAGTTGTAAACATCGGTGGACCATTTTTAGGTGTTCCGAAGGCTATAGCAGGGCTTTTCTCAGCAGAAGCCCGAGATATTGCTGTTGCGAGGGCGATTGCACCAGGTTTTTTAGATAACGACATGTTTCGGATTCAAACGTTGCAACATGTTATGAAGATGACTCGCACTTGGGACTCAACAATGTCAATGATACCAAAAGGAGGGGACACCATATGGGGTGGCTTTGATTGGTCACCAGAGGCGGGCGATCACCTTACCATGAAAAAGAAAAGCAGGGCCAATGCTAAGTTGCGAGACCGAAAGGAAAACAAAACAAATGTTGTTAACTATGGAAGAATGATATCATTTGGCAAAGATGTTGCAGAAGCAGATTCGCCTGAGATTGAGATTCTTGACTTTCGGGGTGCAATTAAAGGTCCCAATGTTGCAAATACCTCTTGTCGTGATGTGTGGACTGAATACCATGACATGGGAGTTGAGGGAGTAAGAGCAGTTGCGGATCATAAAGTTTACACAGCTAGCTCAATCATAGACCTACTTCAGTTTGTTGCTCCGAAAATGATGGCGCGTGGTAGTGCTCATTTCTCTTACGGAGTAGCTGACAATTTAGACGATCCTAAATATGAACACTACAAATATTGGTCAAACCCCTTGGAGACAAAATTACCAAATGCTCCTGATATGGAAATCTTCTCTCTATACGGAGTTGGACTACCGACGGAAAGAGCTTATATTTACAAGTTAACTCCCTTTGCCGAGTGTTACATTCCTTTTGAAATCGATCCTACAGCCAAAGGTGGCGACGAAATTAGTTGTCTTAGAGATGGTGTCTACACGGTTAATGGCGACGAGACTGTGCCAGTTCTAAGTTCAGGCTACATGTGTGCTAAAGCTTGGCGCGGAAAAACAAGATTCAATCCTTCAGGGATCCGCACTTATGTTCGAGAATACGATCATTCTCCTCCAGCCAACCTGCTAGAAGGAAGAGGAACACAAAGTGGTGCTCACGTTGATATAATGGGAAACTTCGCGTTGATTGAAGATGTTATGAGGATTGCCGCGGGAGCCAAAGGAGAAGAATTGGGAGGCGATAAAGTGTATTCCGATATCTTTAAATGGTCTGATAGAATCAAGTTACCTTTGTGA 2055 0.4302 MSSIRRRKGSEPEKGPSENSEPKIQKKEGEEEEREDDDNDKNKENRNKNKNGVDVLKKKKSKWSCIDSCCWFVGCICTLWWFLLFMYNVMPASFPQYVTEAITGPMPDPPGLKLKKEGLRVKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWVEHMSLDNESGLDPPGIRVRPVTGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQTLSQIKSNIELMVSTNGGNKAVIIPHSMGVLYFLHFLKWVEAPAPMGGGGGPDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARAIAPGFLDNDMFRIQTLQHVMKMTRTWDSTMSMIPKGGDTIWGGFDWSPEAGDHLTMKKKSRANAKLRDRKENKTNVVNYGRMISFGKDVAEADSPEIEILDFRGAIKGPNVANTSCRDVWTEYHDMGVEGVRAVADHKVYTASSIIDLLQFVAPKMMARGSAHFSYGVADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGLPTERAYIYKLTPFAECYIPFEIDPTAKGGDEISCLRDGVYTVNGDETVPVLSSGYMCAKAWRGKTRFNPSGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVMRIAAGAKGEELGGDKVYSDIFKWSDRIKLPL* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4236 684 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 32 684 - -
Psa4g4236 684 Coils Coil 27 47 - -
Psa4g4236 684 MobiDBLite consensus disorder prediction 1 30 - -
Psa4g4236 684 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 32 684 - -
Psa4g4236 684 MobiDBLite consensus disorder prediction 1 48 - -
Psa4g4236 684 Pfam Lecithin:cholesterol acyltransferase 149 644 IPR003386 GO:0006629|GO:0008374
Psa4g4236 684 Gene3D alpha/beta hydrolase 147 356 IPR029058 -
Psa4g4236 684 SUPERFAMILY alpha/beta-Hydrolases 111 411 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4236 Psa-Chr4 374516293 374520902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4236 165 684 Acyl Lipid Metabolism Gene Families AT5G13640 76.482 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4236 K00679 - gmx:100800857 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4236 4 374516293 374520902 Psa4g4236 4 374516293 374520902 ECH