Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4232 ATGGTCCCTGTTTCGAGAACCGAAGGTGGCACTGGTACCCACTTGCTGTCTGCTAAAGTTCGTAAAACTATTCAATCCATTAAAGAAATCGTCGGGAATCATTCTGAGGCGGATATCTATGTTGCCCTTAAAGAGACTAACATGGATCCTAATGAAACTACTCAGAAATTGCTTAACCAAGATCCATTTCATGAGGTGAAGAGAAGGAGAGATCGAAAGAAAGAGAATCAAAGTGTTGGGAACAGGGGTTCGGGTGGTCAACCAAGGAGGCATTCTGACAATGGTGGTCAAAGAGCCCAATTCCACAACCCTCCGGAGCATAATGTTGGGAATAGGAGTTCGGCTGAATCCGAGAGGCATTCTGATAATGGTGGTCAAAGAGCCCAATTCCACAACCATGCTGAACATAATGCTGGGAATAGGGGTTCGGGTGAACCGGAGAGGCAATCTAACAATGGTGGTCAAAAAGCCCAGTTCCACAACCATTTGGAACATAATGAAGGAAGTAAGGGTTCGGGTGAACCGGTGAGGCGTTCTAACAATGGTGGTCAAAGAGCCCAATTCCACAACCATTTGGAACATAATGTTGGGAATAGGGGTTCGGGTGAACCTGATAGGCGTTCTGACAATGGTAGTCAAAGAGCGCAATTCCCCAATCATTTGGAACATAATGCTGGGAACAGGGGTCAGCCAAGGAGGCATTCTGAAAATAGTGGTCAAGGAGGAGTGCAATTCAACAACCCATCTGAACGTATTGTTGGGAACAGAGAGTCTGGTGAACCAAAGAGGCATTCTGAGAATGGTGGTCAAGGAGTGCAATTCAACAACCCTTCGGAACATAACCTTGACAACAAGGGTTCCGGTGAACCAAGAAGACACCCCGAAAATGGTGGTCAAGGAATGCATTTCCACGAACATAGAGTTCGAAGGACAAATTATTCTCGAAATCCTTTACCAAACTTCAGCAGAGAGTTCCGTGTAGTCAGAGACAACCGGGTAAACCATATACAGAAAGATAAAGAAGTAAAGCCTCCTTCACAACACTCAAAATCCACCACTGAGAAATTAGCTGGAAACACTTCTGAAAAGGGCTTGTCAGCAGCTTCTATTAATCAAAAGCCTTCTGGTGCTAGAAATCATCAGGCTGTAAATGGTCCTTCTGATTCACATGCTAGGCTGTCAAAAGATGCCCCTAGGGCTACAAATGTCGGTGACAAAAAAATTACACCCGAGAACATTCAAGGCACGGTGTCGAGTGCCTCAGCACGGGTGCAACCAATTAAGCCTAACAACATCCATCAAAATTCTTCAGCAACGGCTTCAACCAGTTCTGTAGTTGGAGTATATTCCTCTTCTACTGATCCAGTTCATGTGCCCTCCCCTGATTCCAGATCATCGGGAGCAATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGAAGACAGTCTTCTGATCACAAAGGGAAACAGTTGTTTCCTCCTAATTCATTTCAATCCGCTGGCACTGTCCAAAAGACTGAACATCTTAGTCAAACTGCTGTAACTGAGCCCTCATTCCCTGGCGTGGCTGTTAGCAGACCATCCTTGAACAATCCGCATAATAGTAGGCCACATCAACAAGTTATGGGACATCAAAGAGTCTCCCACTCCCAGCATAATAAAGAGTGGAAGCCTAAATCAAGCCAGAAGACAAACAACAACGGTCCTGGAGTGATTGGAACACCCAAAAAAACAATTTCAGCTCCAGCTGAAAATTCTGAAGTTATAGAGTCAGATACAACACAACTTCAGGATACACTTTCACAATTGAATACTGATCGCCGCCGGCTGACCTTTGGTACCGTCGGGGTTGCAACGGAACTTGATTCTTTGATGCTTCAACCTCAGTTTCAATTAATAGGAGCTACTGAAAAGTCAAATGGAGAATCCACTACAAGCTTGACTGCACCCGCTTCAGAGTCATCCACCGATAATGTTTCTGGGAGCAAGCAGGTGAGTTTAAGTGATGACCATGTTAGAAGTTCTGAGTCCGAATCTCCAGCCTCTGGTGTTGCTTCTGAGCAACAGTTGCCCGACAACAAAGAATCCTCAAGCTCTCAGAATCTAGACAACTATGCCAATGTTGGATTGGTACGTGATACAAGTCCGTCCTATGCACCGGCACAGTCACAACAGCAAGATTCTCATGATATGCCTGGCTTTTCAGCTTACGACCCTCCCACTGGTTACGATATTCCTTATTTTAGACCTAACATGGATGAAACTGTACGCTCACAGGTTCTTTCACCACATCAGGAGGTTTTGAACTCCCATGCTGCAAACAATGCTCCCACATCCACAATTGCCATGGTGCAACAACAGCAACAACAACAACAACAACATCAAGTTGCACAGATGTATCCACAAGTTCATCTTTCACATTATGCTAATCTTATGCCCTATCGTCAGTTTCTATCTCCAGTCTATGTACCGCCCATGGCTGTGCCGGGATACTCAAACAGTGCTCCCTATCCTCATCCTACGAACGGAAACTATGTATTGATGCCCGGAGGCGGTTCCCATCTTAATGCCAATAACCTTAAATACGGAGTTCAACAGTTCAAGCCCGTTCCTGCTGGAAATCCTACCGGGTTTGGAAACTTTGCTAACCCAGCTGGGTATGCCATGTTAGCTCCAGGCGTGGTTGGTGGTGCGTCGGGTCTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTCTATGTCCCCAATCCTCAGGGGGAGACATCAGAAGTATGGTTACAAAATCCAAGGGATCTTTCAGGCATGCAATCGACTCAATACTATAACATGCCAGGACAATCACCACATGCCGCTCCATTCATGCCATCACACACGGGTCACGCCTCATTCAATGCAGCTGCGGCTCAGTCATCTCACATGCAGTTCCCTGGCATGTATCATACACCTCCACAACAAGCTGCTATGGCGAATCCTCATCATTTAGGACCGGCAATGGGAAACAATGTCGGAGTTGCTGCAGCTGCTCCTGGAGGAGCACAGGTTGGTGCATATCAGCAACCTCAATTGGGCCATCTCAACTGGACAACAAATTTCTAA 3096 0.4596 MVPVSRTEGGTGTHLLSAKVRKTIQSIKEIVGNHSEADIYVALKETNMDPNETTQKLLNQDPFHEVKRRRDRKKENQSVGNRGSGGQPRRHSDNGGQRAQFHNPPEHNVGNRSSAESERHSDNGGQRAQFHNHAEHNAGNRGSGEPERQSNNGGQKAQFHNHLEHNEGSKGSGEPVRRSNNGGQRAQFHNHLEHNVGNRGSGEPDRRSDNGSQRAQFPNHLEHNAGNRGQPRRHSENSGQGGVQFNNPSERIVGNRESGEPKRHSENGGQGVQFNNPSEHNLDNKGSGEPRRHPENGGQGMHFHEHRVRRTNYSRNPLPNFSREFRVVRDNRVNHIQKDKEVKPPSQHSKSTTEKLAGNTSEKGLSAASINQKPSGARNHQAVNGPSDSHARLSKDAPRATNVGDKKITPENIQGTVSSASARVQPIKPNNIHQNSSATASTSSVVGVYSSSTDPVHVPSPDSRSSGAIRREVGVVGVRRQSSDHKGKQLFPPNSFQSAGTVQKTEHLSQTAVTEPSFPGVAVSRPSLNNPHNSRPHQQVMGHQRVSHSQHNKEWKPKSSQKTNNNGPGVIGTPKKTISAPAENSEVIESDTTQLQDTLSQLNTDRRRLTFGTVGVATELDSLMLQPQFQLIGATEKSNGESTTSLTAPASESSTDNVSGSKQVSLSDDHVRSSESESPASGVASEQQLPDNKESSSSQNLDNYANVGLVRDTSPSYAPAQSQQQDSHDMPGFSAYDPPTGYDIPYFRPNMDETVRSQVLSPHQEVLNSHAANNAPTSTIAMVQQQQQQQQQHQVAQMYPQVHLSHYANLMPYRQFLSPVYVPPMAVPGYSNSAPYPHPTNGNYVLMPGGGSHLNANNLKYGVQQFKPVPAGNPTGFGNFANPAGYAMLAPGVVGGASGLEDSSRVKYKDNLYVPNPQGETSEVWLQNPRDLSGMQSTQYYNMPGQSPHAAPFMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQQAAMANPHHLGPAMGNNVGVAAAAPGGAQVGAYQQPQLGHLNWTTNF* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4232 1031 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 281 1031 - -
Psa4g4232 1031 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 193 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 635 700 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 676 700 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 231 253 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 112 126 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 268 283 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 61 78 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 635 667 - -
Psa4g4232 1031 SUPERFAMILY UBA-like 18 77 IPR009060 GO:0005515
Psa4g4232 1031 MobiDBLite consensus disorder prediction 546 568 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 189 317 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 51 156 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 196 210 - -
Psa4g4232 1031 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 281 1031 - -
Psa4g4232 1031 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 193 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 79 111 - -
Psa4g4232 1031 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 284 312 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 407 460 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 335 471 - -
Psa4g4232 1031 MobiDBLite consensus disorder prediction 349 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4232 Psa-Chr4 374320443 374326773 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4232 - - mtr:MTR_8g019650 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4232 4 374320443 374326773 Psa4g4232 4 374320443 374326773 ECH