Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4210 ATGGCTGCTGAATCTCCTACTTCTATTCGTAAAGTGGTTGTTCATCTCAGAGCTACCGGGGATGCTCCGATTCTCAAACAATCCAAATTCAAGATAGCTGGAACTGATAAATTTGCTAAAGTGATAGAGTTTCTTCGCAGACAGCTCCACAGGGAGACATTGTTTGTATATGTCAACAGTGCTTTTTCACCAAACCCCGATGAACTGGTAGTTGATTTGTATAATATAACAGACATTTTAGCCCGTAAGGCAGTTTCAAGTTTCAACATCAAAAAGTGA 279 0.3978 MAAESPTSIRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIEFLRRQLHRETLFVYVNSAFSPNPDELVVDLYNITDILARKAVSSFNIKK* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4210 92 Gene3D - 1 78 - -
Psa4g4210 92 SUPERFAMILY Ubiquitin-like 10 77 IPR029071 -
Psa4g4210 92 CDD Ubl_ATG12 11 75 - -
Psa4g4210 92 PANTHER AUTOPHAGY PROTEIN 12 1 80 IPR007242 GO:0000045|GO:0005737
Psa4g4210 92 Pfam Ubiquitin-like autophagy protein Apg12 11 76 IPR007242 GO:0000045|GO:0005737
Psa4g4210 92 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 1 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4210 K08336 - tcc:18596213 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4210 4 373176535 373180207 Psa4g4210 4 373176535 373180207 ECH