Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3893 ATGGAGAGGGTATTCATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCTCTTTTGTACTATACATTGAATAAGAAATTGCAGTCTCACAATACAATTGATGATGATGAAGATAGTGGTAGTGATGCGCCGACGGATGGGCGGTTCCGTGTTACTCATAGGTTAATTGAAGCCCCTGCTACATGGTTGGAAACAATTTCAACATTGTCTGAAACTCTCAGGTTTACGTATTCGGAGACACTTGGAAAATGGCCCATTGGGGATTTAGCATTTGGTATCAGCTTTCTTCTCAAGAGACAGGGGAACTATCTTGTTGACAGTGTATTTGGTGGTACGGACAGTGTACAGCTGAAAGGACCTGAGATTATTGCTGAACTTAAGCATCTCTTAAACTTGCTGACTCTGTGTTGGCATTTTTCAAAGAAGTCCTTTCCCTCATTTCTAGAAGAAACTGGTTACACTGATGAGAATGTTCTTCTTCGGGAGGCAAAAGCCGGAATTTTGAAACCAGCTTTTACAATCATAGTTGATCACAAGATGAGGCATCTTTTATTGTTGATTCGTGGCACACATAGTATCAAGGATACTCTAACAGCTGTTACAGGAACCGTGGTACCATTTCATCACACTGTAGTTCATCAGGGGGGAGTTAGTGATTTGGTTTTAGGATATGCACATTGTGGAATGGTTGCTGCTGCACGTTGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGATGCACTTGGCCAATACCCAGACTATGAAGTTAAGATTGTAGGACACTCTTTAGGTGGAGGCACAGCAGCAATTCTTACATATGTATTAAGAGAGCAAATGGAACTGTCTGTGGCTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAATTGGCAGAGTCAGGCAGTAGTTTTATTACTTCTATTATCAATGGTGCTGATTTGGTACCTACATTCTCAGCTGCATCTGTAGACGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAGCAAACAAGAATACTCAGTACTGTATATCGTTCTGCCTCAGCGCTGGGTTCTCGCCTTCCATCTATTGCCAGTGCAAGAGCAAAAGTTGCTGGTGCTGGGGCTATGTTGCAGCCAGTTTCCAATGGTACCCAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGTCCAAACCTTAACCTGACCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCACAGCTGCTCATTCAAACTCCAAAGAAGAAGGTTCCCCTACATCTTCAGGCTCTGGCAGTGCAGAATGTTCTGATCCACTTTGTTCGCCCAAGAAGGGGATAAATGCCAAGAGCATGAACCTTCCTGTATCTTCATCTGTAGAAGAGTGGTCAACTGAAATTGAATGTGTAAATGAAAGTAATGCAGATGACGAGGTGGATGACGATCTCCATCCCAATGAGAACATGCTCAACCATCACAGATATGAGGATCAGATGAGTGAAGTGGAGTTGTGGCAACAACTAGAGCACGAGCTATATGACAGACCTGAAGGCGAGGAGGCTGAAGGGGCTAAGGAGATAAGGGAAGAAGAGGAAGCTGCCATAACCGAGGTAGTAGGGCAAACGCATAACAGCTCTGCAGCAGAAATGAAAGAAATTCACAGATTTTTCCCTCCAGGAAAGATAATGCATATTGTTACGCTCCACTCTGATTCTACCGAGCTTGAAAGTGATGGCAGCCCAACCTCTTCTACAAGTTCGGATGACAGCCAGCTAATTGAGGCGAAGATTGGAATTTTCCTAACATCAAGGTCTCTATATAGTAAACTTAGACTTTCACAGACCATGATCAGTGATCACTTCATGCCAATATACAGAAAGCAGATTGAAAAGCTAATTAAAGAACTTGAGGAAGAATCTATTGAGGATCATATAACACAAGAAGTAATGTTATAG 1992 0.4378 MERVFMATATMATAAGAAALLYYTLNKKLQSHNTIDDDEDSGSDAPTDGRFRVTHRLIEAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYLVDSVFGGTDSVQLKGPEIIAELKHLLNLLTLCWHFSKKSFPSFLEETGYTDENVLLREAKAGILKPAFTIIVDHKMRHLLLLIRGTHSIKDTLTAVTGTVVPFHHTVVHQGGVSDLVLGYAHCGMVAAARWIAKLATPCLLDALGQYPDYEVKIVGHSLGGGTAAILTYVLREQMELSVATCVTFAPAACMTWELAESGSSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIASARAKVAGAGAMLQPVSNGTQVVMKRAKSMAQAAWTRPNLNLTSWSCMGPRRRATAAHSNSKEEGSPTSSGSGSAECSDPLCSPKKGINAKSMNLPVSSSVEEWSTEIECVNESNADDEVDDDLHPNENMLNHHRYEDQMSEVELWQQLEHELYDRPEGEEAEGAKEIREEEEAAITEVVGQTHNSSAAEMKEIHRFFPPGKIMHIVTLHSDSTELESDGSPTSSTSSDDSQLIEAKIGIFLTSRSLYSKLRLSQTMISDHFMPIYRKQIEKLIKELEEESIEDHITQEVML* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3893 663 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 6 651 - -
Psa4g3893 663 Coils Coil 634 654 - -
Psa4g3893 663 CDD Lipase_3 178 323 - -
Psa4g3893 663 SUPERFAMILY alpha/beta-Hydrolases 153 324 IPR029058 -
Psa4g3893 663 Gene3D alpha/beta hydrolase 135 360 IPR029058 -
Psa4g3893 663 MobiDBLite consensus disorder prediction 422 449 - -
Psa4g3893 663 Pfam Lipase 3 N-terminal region 52 131 IPR005592 GO:0016042
Psa4g3893 663 Pfam Lipase (class 3) 187 324 IPR002921 GO:0006629
Psa4g3893 663 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 651 - -
Psa4g3893 663 MobiDBLite consensus disorder prediction 431 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3893 Psa-Chr4 325617802 325624372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3893 20 656 Acyl Lipid Metabolism Gene Families AT3G14075 63.369 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3893 - - gsj:114390808 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3893 4 325617802 325624372 Psa4g3893 4 325617802 325624372 ECH