Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3889 ATGAGACCTTCTTTTGTTGGATTCATCCTTGTTTTTCTCTCAGTTTGCTGTTGCAGCTTTTCTAGCGATGGAAGTACTAAAGCGCAGAGAACTTTAGCGATCATAAAGCCGGATGGATTGCTCGGTAACTACACAGATGATATCAAGAGAACAGTTTCAGAATATGGTTTCAGCATTGTCGAGGAACAGATTGTTCAACTTGACGAGGCGACTGTGAAAAGATTTTATGCAGAACACTCTTCAAAAAGCTTCTTTTCAAGCCTAGTTAAATACATGACAAGTGGACCAGTGTTAGTCATGGTTTTGGAAAAGGATAATGCTGTTGCTGATTGGCGCGCTTTAATGGTCCTACTGATGCAAGCAAGGCCAAGATTACTCACCCTCGCAGCATTAGAGCAAAATGTGGATTGGACACTGAAAAAATTGGTGTCGATGCGTGGCAGACTCTACCAAATCTGCACAAAGAGAGATACTATTTTTCTTCGACGAGCTCGCTCCAGATGTAATTACAGAACACGATGA 522 0.4176 MRPSFVGFILVFLSVCCCSFSSDGSTKAQRTLAIIKPDGLLGNYTDDIKRTVSEYGFSIVEEQIVQLDEATVKRFYAEHSSKSFFSSLVKYMTSGPVLVMVLEKDNAVADWRALMVLLMQARPRLLTLAALEQNVDWTLKKLVSMRGRLYQICTKRDTIFLRRARSRCNYRTR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3889 173 SUPERFAMILY Nucleoside diphosphate kinase, NDK 28 115 IPR036850 -
Psa4g3889 173 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 14 115 - -
Psa4g3889 173 PRINTS Nucleoside diphosphate kinase signature 31 53 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa4g3889 173 PRINTS Nucleoside diphosphate kinase signature 75 94 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa4g3889 173 PRINTS Nucleoside diphosphate kinase signature 95 112 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa4g3889 173 Gene3D - 20 130 IPR036850 -
Psa4g3889 173 Pfam Nucleoside diphosphate kinase 29 115 IPR034907 -
Psa4g3889 173 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 14 115 - -
Psa4g3889 173 SMART ndk_5 28 144 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3889 Psa-Chr4 325111322 325113464 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3889 K20790 - gmx:100500470 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3889 4 325111322 325113464 Psa4g3889 4 325111322 325113464 ECH