Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3886 ATGTCTCCTATAGCTACTCTCGTTACCACTCTCTTCCTCATCATATTTCTCCAAACACAAGCTTCCGTTCACGATTACAGAAGCGAAACTTTCTCTGTCAAAGGTAACGCCTTTGTCGTCCATGGAGGCAGCGAAGGAATTTACTCATCTACCCTCAATGAAACTTCCGTCTCACCTTCAATTCCCGACTCTTTCATTAGGTTTGATAAAGTCACATTCCGTAGAAACAAGGAATTATCAAACTTTAGCTCATGGCCGATTCAAGCTGTTGTTTTTGAAGTTGAAGATAGAGAGATGATTGGTGGTTCGGCCTATGGGGGTCAACGGGCCGTTTGTTGCACTGGTGATCTGGCTAAACTCGGTGTGTGCAATGAAGGGCGTGTCATTCACCGTCCTTCTACCACCGTGAATTCGGATTGGCCTCAAGTTTTTGGTGTTGCTTTCGAGATGGACGATGAAGTGGCAGAGCTGCCGTTGAAATCTATACAGATCACGAAAACTGGGATGTATAATTTGTATTTCATTCATTGTGATCCGAGGCTTAAGGAATTGGTTGTAGAAGGGAAAACTGTATGGAAGAATCCATCGGGTTATCTTCCCGGTAGAATGGCACCGATGAAAATTTTCTTCCAGTTCATGTCTTTCGCGTATGTGTTGCTTGGTGTGTTTTGGTTCTTTCAATATGTTAGATTTTGGAAGGAAATATTTCCACTGCAAAACTGCATCACACTAGTGATAACACTAGGAATGTTTGAGATGGCTTTTTGGTACTTTGACTATGCTGAATTTAGCGAAACAGGAGTCAGGCCAACCGGGACGACCATATGGGCAGTTACGTTTGGAACTGTTAAGAGAACTATTGCACGGTTGATCATTTTGATCGTTTCAATGGGCTACGGTGTTGTGAGACCTACCCTTGGAGGCCTTACATCGAAGGTTGTTATGCTTGGTGGAACCTTCTTTGTTGCATCTGAAGTTCTTGAATTGGTAGAACATGTTGGTGCAATAAGTGATCTTTCGGGTAAAGCAAAACTTTTTTTGGTTCTTCCCGCTGCGGTATTAGATGTGTTCTTCATTCTTTGGATTTTCACTTCATTGTCTGCAACGTTAAATAAACTTCAGGCTAGAAGGATGATGATAAAATTAGATATGTATCGGAAGTTCACCAATGCTTTGGCAGTAGCTGTGGTGGTATCTGTGGGATGGATATGTTATGAGCTGTATTTCAAATCAAATGATATATACAATGAGCAATGGCAAAATGCTTGGATCATCCCAGCCTTTTGGCAAGTTCTATCCTACTCTCTCCTGTGTGTCATCTGTGTTCTCTGGGCACCATCTCAAAATTCAACGCGATATGCTTACCGTGACGATGGGAGCGAGGAGTTTGACAGAGATGATACTACTTTGACGCTCATAAAACCGTCGTCTATTTCAACAAAGGATGTTAGAAGTGTTCCAGATGTAAGGCCAGTACAAGACAACAATGGAACTTCAAATGATGATTTAGAAGAAGATAAAAGAGAATAA 1530 0.4183 MSPIATLVTTLFLIIFLQTQASVHDYRSETFSVKGNAFVVHGGSEGIYSSTLNETSVSPSIPDSFIRFDKVTFRRNKELSNFSSWPIQAVVFEVEDREMIGGSAYGGQRAVCCTGDLAKLGVCNEGRVIHRPSTTVNSDWPQVFGVAFEMDDEVAELPLKSIQITKTGMYNLYFIHCDPRLKELVVEGKTVWKNPSGYLPGRMAPMKIFFQFMSFAYVLLGVFWFFQYVRFWKEIFPLQNCITLVITLGMFEMAFWYFDYAEFSETGVRPTGTTIWAVTFGTVKRTIARLIILIVSMGYGVVRPTLGGLTSKVVMLGGTFFVASEVLELVEHVGAISDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLNKLQARRMMIKLDMYRKFTNALAVAVVVSVGWICYELYFKSNDIYNEQWQNAWIIPAFWQVLSYSLLCVICVLWAPSQNSTRYAYRDDGSEEFDRDDTTLTLIKPSSISTKDVRSVPDVRPVQDNNGTSNDDLEEDKRE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3886 509 MobiDBLite consensus disorder prediction 479 509 - -
Psa4g3886 509 Pfam Lung seven transmembrane receptor 164 450 IPR009637 GO:0016021
Psa4g3886 509 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 9 509 - -
Psa4g3886 509 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 9 509 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3886 Psa-Chr4 324994629 324998226 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3886 - - gmx:100806912 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3886 4 324994629 324998226 Psa4g3886 4 324994629 324998226 ECH