Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3859 ATGAGTTTGTTTGACATGGATTTGAGTGGTGTAGTGAACAATCTGTTCAACCTTCATGAAACTCCTAGGATTCACGACAATCATGAGAGCAGAAAAACTTCCACTAGTGTCCCAGTTGACATTTTGGATACTCCTAAGGAATATATATTCTTCATGGATTTTCCTGGTCTCTCCAAGTCGGAAATTCAGGTGACAGTTGAAGATGAAAACACTCTTGTGATAAAGAGCAATGGAAAAAGGAAACGCGGAGATGGAGAAGATGAAGGCTGCAAGTACCTTAGGCTGGAGAGAAGAGCGCCTCAGAAAATGCTGAGGAAGTTTCGTTTGCCAGAGAATGCTAATGTATCGGAAATCACAGCTAAATGTGAGAATGGAGTTCTTACTGTGGTTGTAGAGAAGCAGAGTCAACCTCCAAAATCAAAAACAGTTGAAGTTGCCATTGTTTAA 447 0.4072 MSLFDMDLSGVVNNLFNLHETPRIHDNHESRKTSTSVPVDILDTPKEYIFFMDFPGLSKSEIQVTVEDENTLVIKSNGKRKRGDGEDEGCKYLRLERRAPQKMLRKFRLPENANVSEITAKCENGVLTVVVEKQSQPPKSKTVEVAIV* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3859 148 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 25 147 - -
Psa4g3859 148 Pfam Hsp20/alpha crystallin family 40 145 IPR002068 -
Psa4g3859 148 SUPERFAMILY HSP20-like chaperones 32 142 IPR008978 -
Psa4g3859 148 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 25 147 - -
Psa4g3859 148 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 30 148 IPR002068 -
Psa4g3859 148 Gene3D - 4 147 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3859 Psa-Chr4 322365732 322366968 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3859 K13993 - gmx:100803161 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3859 4 322365732 322366968 Psa4g3859 4 322365732 322366968 ECH