Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3857 ATGGCTCTGCGGGGAATTTGGCAACTTAAGAAGCTTGTTGTTAGTTATAGCGATTGGGGTGGAAGTAGCAAAGGTATAAGGGCATTTATGGAGTGTCATATGCCAGCGTTTAAGGAGTCGAATCCTCAGTTAGAGGTGGCCACTGAAATGATTCGTGGTCAGCATCCACATCTAAAGGCTTTTTACAAGAACCATAACGATCGAGTGGTGTGTGTGAAGAATATGGATCCAGAAGAGATACTTCTGCATGCTACCAGGCTGAGGAATGCACTCGGAAGGAAAGTAATAAAACTGAGGACACGGCATGTAACCAAACACCCTAGTGTGCAAGGTACATGGTCAACTGCTTTGAAATTATAG 360 0.4417 MALRGIWQLKKLVVSYSDWGGSSKGIRAFMECHMPAFKESNPQLEVATEMIRGQHPHLKAFYKNHNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWSTALKL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3857 119 SUPERFAMILY Thioredoxin-like 8 90 IPR036249 -
Psa4g3857 119 Pfam Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 26 76 IPR007741 -
Psa4g3857 119 Gene3D Glutaredoxin 1 119 - -
Psa4g3857 119 PANTHER 39S RIBOSOMAL PROTEIN L43 1 117 IPR039927 GO:0003735|GO:0032543
Psa4g3857 119 SMART L51_S25_CI_B8_2 18 91 IPR007741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3857 Psa-Chr4 322228737 322229609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3857 K17424 - dct:110100521 218.394