Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3856 ATGACATGCTTGCCCAAGAAACATGGTACACTATTCATATTTGGAGATTCTCTATTTGATAATGGAAACAACAACTACATCAATACAACCACAGATTATCAAGCTAATTATCCTCCTTATGGACAAACTTTCTTCAAATATCCTTCCGGCAGGTTTTCCGACGGTCGCATGATACCAGATATTGTTGCTGAATATGCCGGGTTGCCATTGCTTCCACCATATTTGCATCCAGGTCACCCTGAATATGTCTATGGAGTTAATTTTGCATCAGGAGGATCTGGTGCACTCTCACAAACATCTCAAGAAAGTGTGATAGACTTGAATACTCAGTTGAGTTATTTAAGAAAGGTGAAGACATTATTCAAGGAGAAACTTGGACATGAAAAAACAGAGGAATTGATGTTGAAATCTGTGTACTTGTTTAGTGTTGGAAGCAATGATTATGGTACTCTTGTTGATCCAAACTCAGGTGTTCTTCTACCTGTTGATCATCAACAATTTGTTGATAATGTCATTGAAAACCTCTCAAATGTCATCAAAGAAATTTATGACCTAGGTGGAAGGAAATTCGGGTTGGTTAATGTAGGCCCTATAGGATGCTCTCCAAGCATAAGAATATTGGTAAGAAACTATGAATGCTTAGAAGAAATTTCAGCAGTGGCAAAACTACACAATAAGAAACTCACAGAAATGGTTCAGAAGCTAGAGAATCAGCTAGAGGGATTCAAATATTCAATCACTGATTTCTATAGTGCACTTTCTCAAGTGTTGAAATACCCTTCAAAATATGGGTTCAAAGAAGCAAGTAGAGCATGTTGTGGAAGTGGGCCTTATAGAGGAGAAGACAGTTGTGGAGGGAAGAAAGGGATAAAAGAATATGAGTTATGTGAAAATGTGAGTGAACATGTGTTCTTTGACTCTCATCATCCTACAGATAAAGCGAATCAGCATTTTGCCAATTTGATTTGGAATGGAAATGGAAATGTCACATGGCCTTACAATCTAAAACAACTTTTTGAAATTTGA 1026 0.3713 MTCLPKKHGTLFIFGDSLFDNGNNNYINTTTDYQANYPPYGQTFFKYPSGRFSDGRMIPDIVAEYAGLPLLPPYLHPGHPEYVYGVNFASGGSGALSQTSQESVIDLNTQLSYLRKVKTLFKEKLGHEKTEELMLKSVYLFSVGSNDYGTLVDPNSGVLLPVDHQQFVDNVIENLSNVIKEIYDLGGRKFGLVNVGPIGCSPSIRILVRNYECLEEISAVAKLHNKKLTEMVQKLENQLEGFKYSITDFYSALSQVLKYPSKYGFKEASRACCGSGPYRGEDSCGGKKGIKEYELCENVSEHVFFDSHHPTDKANQHFANLIWNGNGNVTWPYNLKQLFEI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3856 341 CDD SGNH_plant_lipase_like 10 326 IPR035669 -
Psa4g3856 341 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 340 IPR044552 -
Psa4g3856 341 Gene3D SGNH hydrolase 5 326 IPR036514 -
Psa4g3856 341 Pfam GDSL-like Lipase/Acylhydrolase 11 322 IPR001087 GO:0016788
Psa4g3856 341 Coils Coil 218 245 - -
Psa4g3856 341 SUPERFAMILY SGNH hydrolase 10 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3856 Psa-Chr4 322227109 322228527 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3856 10 339 Acyl Lipid Metabolism Gene Families AT4G10950 31.792 2.36e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3856 - - gmx:100808852 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3856 4 322227109 322228527 Psa4g3856 4 322227109 322228527 ECH