Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3838 ATGTGGAAGCTGGATTTTTGTTTGTCAATGGATGCAATAGACAAGGCATTTTCTGAGCTTGTCAGCATCATTAAATCATGGATACCCTGGCAATCTGAGCCAGCGAACGTGTCGCGTGATTTTTGGATGCCGGATCACAGTTGTAGAGTATGCTACGAGTGTGATGCACAATTCTCTTTGTTTAATCGTAGACACCATTGTCGTCTCTGTGGACGGATTTTCTGTTCCAAGTGTACTACAAACTCCGTTCCTGCCCCGTTTAGCGGAACTCAGAGGAATTCTTGGGATGAGTGGGAAAAGATTCGTGTGTGTAATTACTGTTACAAGCAATGGGAGCAGGGTATAGTTTCTTTTGATAACAGTGGCCAGGTTTCTAATCTTGAACGTACAATGTCAGCTTCTAGTGTGTCTAGTACTAAAACTAGTGCCACGGTTAACAGTAGTAACATTACTATTTGCTCCATGCCTTATTCAGTTGGTTCTTATAAACAAAAACAACAGGGTTCATTTGTGAACAACCTACATCAATCACATCAATCACCTAAGAGGGCAAAAGAAACTGATAGGGAAGGTTTATCATCCATAGGAGCCAGGAGTATTGATCTTGTAGAAGACCTAGGGGACCCATTAACGAAGCAATACGGGTTCTCAATAAGCAGGAGTGACGATGATGAGGATGAGTATGATGTATATCGGTCGGATTCTGATATAAGGCAATATCCTCAAGTGAATAGCTACTATGGACAAGCTGTGCTTGATGGAATAAACAATATTGATGGCTCACAGAAAGTGCATCCCAATGGAGAAAACATTGATGCAAAACTCTCTTCAAAGTACAACTTTGATGCATGTGGTTTGGAAGGAACACCAGTTATTGCAAAAAATGAAGATGAACCTGATGTCTGTGATGAAAATGAAGCACCTTCCTTGTTATATGTTTCAGAGGATGTTGATGCTGAACCTGTCGATTTTGAAAATAATGGACTTTTGTGGCTCCCCCCTGAACCAGAAGATGAAGAAGATGACCGGGAAACTAGTATGTATGATGACGATGATGATAATGATGGGAATGACACTGGAGAGTGGGGCTATCTTCGCAGTTCAAGCAGTTTTGGAAGTGGGGAGTATCGACAGAGAGATAGGTCAAATGAGGAACACAAGAAAGTAATGAAGAATGTAGTTGATGGACACTTTAGGGCTTTGGTATCGCAGCTGTTACAGGTTGAGAACCTACCAGTTGAAGACAATAACAAAAACAGTTGGTTGGAAATAATCATATCTCTGTCATGGGAAGCTGCTAATTTACTGAAACCAGATATGAGCAAGGGTGGAGGGATGGACCCAGCTGGTTATTCGAAAGTCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGACGTCGAAAGTGGATAAACCTCGCTTATTGATCCTTGGAGGGGCTCTTGAATATCAGCGTGTTACTAATCTCTTGTCTAGTGTTGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCACACCAGCCAAGTATCCTTCTGGTAGAGAAATCAGTTTCTCGATATGCACAAGAATATCTTCTTGCAAAAGACATAACACTAGTTCTCAATGTAAAGAGACAGCTTTTAGAGCGCCTAGCACGTTGTACTGGCACTCAAATAGTGCCTTCAATTGATCATCTTTCATCACAAAAGTTGGGTTACTGTGAAACGTTTCATGTTGAAAAATTTCTCGAAGACCTAATTGTTGCTGTTCAGGGTGCAAAAAAACCAATGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTAGGTTGCACAATTTTACTTAGAGGAGCTGACATGGATGAACTGAAAAAGGTAAAGCATGTGGTTCAGTATGCAGTTTTTGCAGCCTACCATTTGGCCATGGAGACATCTTTTCTTGCTGATGAAGGAGTCTCGCTGCCAGAACTTCCATTAAACAGTCTCGCCCTTCCAAATAAGTCGTCATCCATTCAAAGGTCAATCTCAACGGTTCCTGGTTTTAGTGTTCCGGGCAATGAGAAGTCTCAGATTCATGATCCCAACACTGGACCACGGAGGACCAAAAGTGGCACAGTTGCTGAACTAGTCTCCCCAGTTTGCAATACAGGATCCTTATCTAATGGTTATTCTCAATCTTTGCCATCTGGATCAAATCTTAACCATTCAACTGCCTTTTACTCCTCCATTGTTGCTTCAGGAGATGATATTCCTGAATTGCACCATAGGAAGCTTCTTCCCAAACAACCCCTGGTAAAAGAAACTTCTGCGGTGGATAACACTCTGGTAGTCATGGATGATACCTTTGTAAATGGTACAGAAACTTCAGAGCAAATATATCAAGGCATTTTAGCTGAAAATTCTCGAAATGGTCATAGCCAAATCTATGCAAATCAATTAAGCGCTTCTGGGTCGTTACCTCCAAATGATGCTCAAAACCATACCGAGAAGAAGCTTGTAACCACAAATGAAGAACCAGTTCCTCAAAAAGAAGAGTTTCCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCATCTCGTTGTGTATGGAAGGGAACCGTGTGCGAGAGGTCCCATCTATTTCGAATTAAATACTATGGAAGCTTTGACAAGCCGTTGGGTCGGTTCCTGCGGGACCATTTATTTGATCAGAGTTATCGATGCGATTCTTGTGATATGCCATCGGAAGCACATGTGCATTGCTATACTCATCGACAGGGAACACTTACCATATCGGTAAAAAAACTACCAGAAATTATCCTGCCTGGTGAAAGGGAGGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAGTGGCTTTCCTCCTGCCACACAGAGAATAGTAATGTCTGATGCTGCTTGGGGTTTATCATTTGGAAAGTTTTTGGAGCTCAGTTTTTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCTCTACACAGAGATTGTCTTCGCTTTTATGGATTCGGGAAAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCTCCACACAAACTGAATTTTGATCACGGGAAACAGGATTGGATACAGAAAGAATCAGAGGAGATGGTCAATCGAGCAGAGCTTTTATTCTCAGAAGTACTCAATGGTCTTAGTCAAATTGGAAAGAAAAAATCTAATTCAGTCCAAATTAGTAGTGGTCATAAAACACCGGAATTAAGACGTCAAGTTGCTGAACTGGAAGGAATGTTGCAAAGGGAGAAACTGGAATTCGAGGAAACTCTTAAAAAGATTTTAAACCAAGAAAAGAGAATTGGCCAACCAGGAATTGACATTCTGGAAATTAATCGACTGTGGAGGCAGTTACTTTTCCAATCGTATATGTGGGACCACCGCCTTGTGTATGCAGACAGCTTAGCTAATTCCAACAATGAAACTGGTTTAAACAATTCAATTTCAGAAGATAAGGAAATATCTGTAGATGAAAATTTGATGACTGGGGTCTCCTTGGCAGGAAGGGGATTCAGCAGTACTGACTCTATTCATGGACTAGTTGATGCCAAAAGTTCCCAATCAGATGCATTTCCTCAAGAAATTGATGTGGTAAAAAATAAACAAAACGAGAAAGAACAGCCCAATCTTTCTATCAGCAAAAGCACAAATGATCAATCGGACCTTTTAGAACCTGAATTGGGTGTTCGTAGAGCTCTCTCGGAGGGGCCATTTCCCGTTGTACCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGAAAACCAGTCAGGAATTGGAATTCAAAAGGATAGCACTTCCATAAACCCTGATATATCTATAGCAGATGCTTTGACTACCACTACACAAAGAGAAACCTACTATCTCGGGGATCGAGCAGAAGACCAAAACGGTTCCAAGAGCATCTTTTCTGCTCTTAAAAGTCATGATAATCTGGAAGACTCTTTAAGTTGGTTAGGGATGCCCTTTGTAAACTTCTATCGCCAATTTAACAAGAGTTTGTTTGCTAGTAGCCAGAAGATTGAAACACTAGTGGACTACAATCCCGTTTTTGTATCGTCATACGGGAAGCTGGGACTCCAAGGTGGTGCAAGGATGCTTCTGCCGATCGGTGTTAATGACAGTGTAATTCCAATATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTGATGTCATCGGAATATCATTTCCAGTTATCTGATGAATCAGAGAAACCAAAAGATGGGAGTGAATTGGCATCATCTTATTTTTCGGATTCTGGTGCCTTCCAGTCATTTTCATCTGCCGATGATACAGCTTTTGATTCTCAAAAAAGTTTTGGGTCAATCGAGGATATGATATTGTCAATGTCTGGTTCTCGTAACTCATCAATGTTGGACCCAGTGATGTATACAAAAGCTATGCATGCCAGAGTTTCCTTTGGAGAAGACGGTCCCCTTGGAAAGGTAAAATATTCTGTGACGGCTTACTATGCGAAGCGATTTGATGCCTTAAGAAGAGTATGTTGTCCTTCAGAGCTTGACTACATAAGGTCTCTAAGTCGCTGTAAGAAATGGAGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACCTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAACTTGAATCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGAACAGGAAGTCCAACATGCCTGGCAAAGATTCTTGGCATATACCAGGTTACTTCAAAGCATCTCAAAGGAGGTAAAGAGTCAAAGATGGACGTTTTGGTTATGGAGAATCTTCTATTTAGGAGGACCGTGACACGACTTTACGATCTCAAAGGATCTTCTAGGTCTCGGTATAATCCAGATAGTACAGGGAAAAACAAAGTTCTGCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCTATTTTTGTGGGAAACAAAGCAAAACGTCTGTTAGAAAGAGCCGTCTGGAATGATACTGGTTTTCTTGCATCAGTTGATGTAATGGACTATTCATTACTAGTTGGGGTGGATGAAGAAAAGGACGAGTTAGTTCTTGGAATAATTGATTTCATGAGGCAGTATACATGGGACAAGCATCTTGAAACATGGGTGAAAGCTTCAGGAATCCTTGGAGGACCAAAGAACACACCACCAACAGTTATATCACCAAAGCAGTACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCAGATCAGTGGTCCCCACCATCTATTATTCCTAGTCATTCTCAGTCTGATTTAGGTGAAGAAAAAGAAAACAAAGAAAAAGAAAACAATACACAGTCTAGGCCCTTAGCTGAATGA 5493 0.4122 MWKLDFCLSMDAIDKAFSELVSIIKSWIPWQSEPANVSRDFWMPDHSCRVCYECDAQFSLFNRRHHCRLCGRIFCSKCTTNSVPAPFSGTQRNSWDEWEKIRVCNYCYKQWEQGIVSFDNSGQVSNLERTMSASSVSSTKTSATVNSSNITICSMPYSVGSYKQKQQGSFVNNLHQSHQSPKRAKETDREGLSSIGARSIDLVEDLGDPLTKQYGFSISRSDDDEDEYDVYRSDSDIRQYPQVNSYYGQAVLDGINNIDGSQKVHPNGENIDAKLSSKYNFDACGLEGTPVIAKNEDEPDVCDENEAPSLLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDDRETSMYDDDDDNDGNDTGEWGYLRSSSSFGSGEYRQRDRSNEEHKKVMKNVVDGHFRALVSQLLQVENLPVEDNNKNSWLEIIISLSWEAANLLKPDMSKGGGMDPAGYSKVKCIACGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPSILLVEKSVSRYAQEYLLAKDITLVLNVKRQLLERLARCTGTQIVPSIDHLSSQKLGYCETFHVEKFLEDLIVAVQGAKKPMKTLMFFEGCPKPLGCTILLRGADMDELKKVKHVVQYAVFAAYHLAMETSFLADEGVSLPELPLNSLALPNKSSSIQRSISTVPGFSVPGNEKSQIHDPNTGPRRTKSGTVAELVSPVCNTGSLSNGYSQSLPSGSNLNHSTAFYSSIVASGDDIPELHHRKLLPKQPLVKETSAVDNTLVVMDDTFVNGTETSEQIYQGILAENSRNGHSQIYANQLSASGSLPPNDAQNHTEKKLVTTNEEPVPQKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCDSCDMPSEAHVHCYTHRQGTLTISVKKLPEIILPGEREGKIWMWHRCLRCPRISGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHKLNFDHGKQDWIQKESEEMVNRAELLFSEVLNGLSQIGKKKSNSVQISSGHKTPELRRQVAELEGMLQREKLEFEETLKKILNQEKRIGQPGIDILEINRLWRQLLFQSYMWDHRLVYADSLANSNNETGLNNSISEDKEISVDENLMTGVSLAGRGFSSTDSIHGLVDAKSSQSDAFPQEIDVVKNKQNEKEQPNLSISKSTNDQSDLLEPELGVRRALSEGPFPVVPSLSDTLDAKWTGENQSGIGIQKDSTSINPDISIADALTTTTQRETYYLGDRAEDQNGSKSIFSALKSHDNLEDSLSWLGMPFVNFYRQFNKSLFASSQKIETLVDYNPVFVSSYGKLGLQGGARMLLPIGVNDSVIPIYDDEPSSIIAYALMSSEYHFQLSDESEKPKDGSELASSYFSDSGAFQSFSSADDTAFDSQKSFGSIEDMILSMSGSRNSSMLDPVMYTKAMHARVSFGEDGPLGKVKYSVTAYYAKRFDALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESKMDVLVMENLLFRRTVTRLYDLKGSSRSRYNPDSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKDELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSIIPSHSQSDLGEEKENKEKENNTQSRPLAE* 1831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3838 1830 MobiDBLite consensus disorder prediction 1244 1261 - -
Psa4g3838 1830 SMART fyve_4 37 113 IPR000306 GO:0046872
Psa4g3838 1830 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 10 1812 - -
Psa4g3838 1830 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1485 1646 IPR027484 -
Psa4g3838 1830 SMART PIPK_2 1499 1790 IPR002498 GO:0016307|GO:0046488
Psa4g3838 1830 SUPERFAMILY FYVE/PHD zinc finger 40 113 IPR011011 -
Psa4g3838 1830 CDD PIPKc_PIKfyve 1526 1789 IPR044769 GO:0000285
Psa4g3838 1830 SUPERFAMILY GroEL apical domain-like 464 636 IPR027409 -
Psa4g3838 1830 MobiDBLite consensus disorder prediction 1799 1830 - -
Psa4g3838 1830 Gene3D - 1648 1790 - -
Psa4g3838 1830 MobiDBLite consensus disorder prediction 172 192 - -
Psa4g3838 1830 MobiDBLite consensus disorder prediction 1241 1261 - -
Psa4g3838 1830 Pfam TCP-1/cpn60 chaperonin family 405 663 IPR002423 GO:0005524
Psa4g3838 1830 CDD Fab1_TCP 399 670 - -
Psa4g3838 1830 MobiDBLite consensus disorder prediction 327 364 - -
Psa4g3838 1830 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1465 1789 IPR002498 GO:0016307|GO:0046488
Psa4g3838 1830 MobiDBLite consensus disorder prediction 334 358 - -
Psa4g3838 1830 SUPERFAMILY SAICAR synthase-like 1522 1789 - -
Psa4g3838 1830 Gene3D GroEL 464 636 IPR027409 -
Psa4g3838 1830 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1733 1787 IPR002498 GO:0016307|GO:0046488
Psa4g3838 1830 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1564 1731 IPR002498 GO:0016307|GO:0046488
Psa4g3838 1830 Coils Coil 1113 1140 - -
Psa4g3838 1830 Pfam FYVE zinc finger 42 111 IPR000306 GO:0046872
Psa4g3838 1830 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 45 112 IPR017455 -
Psa4g3838 1830 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 10 1812 - -
Psa4g3838 1830 CDD FYVE_PIKfyve_Fab1 41 109 - -
Psa4g3838 1830 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 116 IPR013083 -
Psa4g3838 1830 MobiDBLite consensus disorder prediction 1808 1824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3838 Psa-Chr4 321352251 321363707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3838 11 1813 EF-hand Containing Proteins AT3G14270 58.976 0.0 2028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3838 K00921 - gmx:100819364 2927.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3838 4 321352251 321363707 Psa4g3838 4 321352251 321363707 ECH