Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3836 ATGTATGCAAAAAACAAGGACTATTACACCAACAACAACCCTTTTGTTGATGATTTCATTGATCCACTTTGCAAGCTTAACCTAAGAGAAACCTCTGAGTTTGTCAAATCTTTCCCATTACCAAAACCAAATGCAGAAAACACAAGATTCAGCAATGATTCTTCAACACACCTGAGAAAACTAGAACCTCCTTCAACACCAGGTAGACCACTTTTCAGCTTCACCTCTTCTCCTTCTTCTTCCATTGTTGGAAGAAACAATCTTCCAAGAAAGAGTTTTCCTTCCAAATGGGATGATGCTGAAAAATGGCTCATAAGCACTTCCTGTCATGACTCACCAGCTCACAACAACAACAACATCAATCTTAAAGCTGTTCCTTCAGAATCCTCAAACATTGGAGCCAAACAATGTGATAATAATAACAATAATAGCTTTAAGCAGAAAATGGAAGAAAAGGTTTCAAAAGTTGTTACTAAATGTCAAAGTTCTTCTTCAACTTTGGACCACAATAACAGTCTTGGAGCTTTCAATGGAATCTCATATCCAACAGACATAGTTCTAAAAGATAAGTTTACAGACAGCATAGAACCTGTTTTACCGAAATTCATCTACTCAGAACCAACAAAAGAAGGATTCTTGTTTAAAAACAAAGCTTATGATGAATCAATGAATGATGCTGCTTACACTGAAGTGATTCATGAGGTTAAACACAAAGATGTTGGCACGGAGATGACTCCGTTAGGAAGTTCGACGACTTCGAGATGTCATACGCCGTTCAAGAGTTCATCGCCTGCGCGGCATAACACTCCGGCTAGTAGATCAGGACCGTTGGCGTTGGATAATGTCGATGGCAATGGCTGCAGTGTGGATGGTATTAAGCTGGAAGAGTGTCATTTTGATAAACTGCAATTTGGAACAGCCAAGTATGATTTGGTTGCGCCGAATTGGAGTTCGAGCGAAGAGGAGGAGAAGGAGATATCGAAAAGTTTGCGACATAATGCTAGTTTGAAAGCTGATTCTGATTGCATTGCTTCTACTTGGGAAGAAGAGGAGAAGAATAAGTGTTGTCTTAGGTATCAAAGAGAAGAAGCAAAAATCCAAGCTTGGATTAACCTCCAAAATGCTAAAGCAGAAGCTAGGTCAAGAAAGCTTGAGGTGAAAATCCAAAAGATGAAATCAAACTTAGAAGAGAAGTTGATGAAGAGGATGTCAGTGGTTCACAGGAAAGCTGAGGAATGGAGAGAAACAGCTAGACAGCAGCACTTAGAACAAATGGAAAAATCAACTCAACATGCTAAAAAGATTATTCATAAGCATAATTCACAATTTTCTAGGTACAACTCATGTGGATGTTTTCCTTGTAATAACAACCATTGA 1377 0.3871 MYAKNKDYYTNNNPFVDDFIDPLCKLNLRETSEFVKSFPLPKPNAENTRFSNDSSTHLRKLEPPSTPGRPLFSFTSSPSSSIVGRNNLPRKSFPSKWDDAEKWLISTSCHDSPAHNNNNINLKAVPSESSNIGAKQCDNNNNNSFKQKMEEKVSKVVTKCQSSSSTLDHNNSLGAFNGISYPTDIVLKDKFTDSIEPVLPKFIYSEPTKEGFLFKNKAYDESMNDAAYTEVIHEVKHKDVGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLALDNVDGNGCSVDGIKLEECHFDKLQFGTAKYDLVAPNWSSSEEEEKEISKSLRHNASLKADSDCIASTWEEEEKNKCCLRYQREEAKIQAWINLQNAKAEARSRKLEVKIQKMKSNLEEKLMKRMSVVHRKAEEWRETARQQHLEQMEKSTQHAKKIIHKHNSQFSRYNSCGCFPCNNNH* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3836 458 PANTHER OS11G0616300 PROTEIN 9 455 - -
Psa4g3836 458 PANTHER OS02G0116800 PROTEIN 9 455 - -
Psa4g3836 458 Coils Coil 374 401 - -
Psa4g3836 458 MobiDBLite consensus disorder prediction 45 61 - -
Psa4g3836 458 MobiDBLite consensus disorder prediction 45 77 - -
Psa4g3836 458 MobiDBLite consensus disorder prediction 243 277 - -
Psa4g3836 458 MobiDBLite consensus disorder prediction 244 270 - -
Psa4g3836 458 Pfam Remorin, C-terminal region 344 440 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3836 Psa-Chr4 321314628 321317762 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3836 - - gmx:100819894 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3836 4 321314628 321317762 Psa4g3836 4 321314628 321317762 ECH