Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3802 ATGTCTTTCACTGCAACCAAGTTCTCACACTCTCTTCTTGCGGTTCCTGTCAATTCCTCAACTCCAAGATCCAATGAGAAACCACTCTCTTTCTCTTCTGATCTCTTCAAACACAACCCTTCTTCTTCCTCTTTCCTTGGATCCACTCAGAAGTTTCTTCGTTTCAATTCTCCCACTAAGCCGTTTCTTCATCGCCGTTCGTCATCACCTGTTGCTGTTCTTCTTCAACAAACCTCCAATTTGCTTATTACTAAAGAGGAAGGGTTATTGCTTTATGAAGACATGGTATTAGGCAGGTCCTTTGAAGACAAGTGTGCTGAGATGTATTATAGAGGTAAAATGTTCGGTTTCGTTCACTTGTACAATGGCCAAGAAGCTGTGTCGACTGGATTCATCAAGTATTTGCGGAAAGAAGATTGCATCGTGAGCACATACAGAGACCATGTTCACGCGTTGAGTAAAGGGGTCCCTTCTCGAGCTGTGATGAGTGAACTCTTTGGGAAGGCAACGGGATGCTGCCGAGGTCAAGGTGGTTCGATGCATATGTTCTCAAAAGAACACAACGTGCTTGGCGGTTTTGCGTTCATCGGTGAAGGAATTCCAGTGGCTACCGGTGCAGCGTTTTCCATGAAGTACAAAAGAGAGGTGTTGAATCAGGCCGATTCTGATAATGTGGCATTGGCGTTTTTCGGAGATGGGACTTGTAATAACGGACAGTTCTTCGAGTGTTTGAATATGGCGGCTTTGTGGAAATTGCCTATTGTGTTTGTGGTGGAAAATAATTTGTGGGCCATTGGAATGTCGCATATCAGGGCAACTTCAGATCCTCAGATATGGAAAAAAGGTCCAGCGTTCGGAATGCCGGGAGTTCATGTCGACGGGATGGATGTTTTGAAGGTCAGAGAGGTGGCAAAGGAGGCGATTGATAGAGCTAGAAGAGGAGAGGGACCAACTCTAGTTGAATGCGAGACTTATAGATTTAGAGGACATTCATTGGCTGACCCCGATGAGCTTCGTAACCCTGCTGAGAAAGACCACTATGCTGCTAGGGATCCCATCACTGCATTGAAGAAATACCTTTTCGAGAACAAGTTAGCCACTGAACAAGAATTGAAAACGATAGACAAGAAAATCGATGAGAGCCTTGAAGACGCCGTTGAATTTGCCGAAAAGAGTCCTCAGCCACAGCGCAGCCAGCTTCTAGAGAATGTGTTTGCCGATCCGAAAGGTTTTGGAATTGGACCAGATGGCAGGTATAGATGTGAAGATCCAAAGTTTACAGAAGGCACTGCTCATGTCTGA 1302 0.4531 MSFTATKFSHSLLAVPVNSSTPRSNEKPLSFSSDLFKHNPSSSSFLGSTQKFLRFNSPTKPFLHRRSSSPVAVLLQQTSNLLITKEEGLLLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKYLRKEDCIVSTYRDHVHALSKGVPSRAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSMKYKREVLNQADSDNVALAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHIRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPTLVECETYRFRGHSLADPDELRNPAEKDHYAARDPITALKKYLFENKLATEQELKTIDKKIDESLEDAVEFAEKSPQPQRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3802 433 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 78 408 IPR029061 -
Psa4g3802 433 CDD TPP_E1_PDC_ADC_BCADC 91 389 - -
Psa4g3802 433 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 15 433 - -
Psa4g3802 433 Pfam Dehydrogenase E1 component 94 396 IPR001017 GO:0016624
Psa4g3802 433 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 15 433 - -
Psa4g3802 433 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 86 406 IPR017597 GO:0004739|GO:0006086|GO:0043231
Psa4g3802 433 Gene3D - 46 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3802 Psa-Chr4 319737547 319740956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3802 43 433 Acyl Lipid Metabolism Gene Families AT1G01090 81.313 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3802 K00161 - gmx:100811207 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3802 4 319737547 319740956 Psa4g3802 4 319737547 319740956 ECH