Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3785 ATGTTTCATTACAAACTCATTGTCCTATCATTTCTCATTACTCCTATTGTTTGTTTCGTGATTCGTTGGCTATTATTCAAAACTGGATTAATATATGTCACCAAGAAACTCCACAGAAAACTACAAGATTGTTTTTATGTTTATCAATACCTTAAAGTCCCAGAATTGAACGAAAACATGCAACGGAATGAGTTATATCGTAAAGTTTCTCTCTATTTACATTCTCTTCCTTCTCTTGAAGATTCTGATTTCACGAACCTCATTACCGATCATAACCAAAACGACATCGTTTTATCTCTTGACTCTAATCAAATCATTGAAGACCGTTTTCTCGGTGCTAATCTCTTTTGGTTCAACCAAAAAACCGAACCGGGTCAAACCGGTGTGTTCGTTCTCAAAGTCAGAAAAACCGATAAACGGAGAATCCTCAGAAGCTATCTGCGGCACATTCACGACGTCGCCGACGAGATAATGAAACGCGATTTGCGCTTGTTCGCTAATGTCACCGACGGGGAAACGAGATGGAAATCTGTTTCGTTCAATCATCCTGCAACGTTTGACACCATGGCGATGGAAACTGATCTCAAGACCAAAATCAAATCGGATCTCGAATCGTTTCTCAAAGCGAAGCCGTATTACAGACGACTCGGCCGCGCGTGGAAACGGAGCTTCTTGCTGTACGGTCCTTCCGGTACTGGCAAATCGAGCTTCGTCGCTGCAATGGCGAATTTTCTTTGTTATGATGTATACGACGTTGATCTTTCTCAGGTTCGTGGTGATTCGGATTTGAAGTTTCTCTTACTCGAAACAACGCCGAAATCGATCATTCTCGTGGAGGATCTCGACAGGTTTCTGACGGGGGAATCCGGGGTTACGGTGGCCGGGATACAGAATTTCATGGACGGAATCTTAAGTTCGTGTTGCGGCGAAGAGAGGATTCTGGTTTTCACGATGAGCAGTAAGGAAAATATTGACCCGATTTTTCTCAGACCGGGTCGGGTCGACGTTCATATCCATTTCTCATGGTGTGATTTCTCATCGTTCAAAACGCTAGCGTGTAATTACCTCGGAGTGAAGGACCACAAACTGTTTTCGCAAGTGGAGGAAATTTTCCGGAACGGTGCGAGTTTAAGCGCGGCGGAGATCAGCGAGTTGATGATCGCGAATCGGAATTCGCCGAATCGGGCTATTAAATCGGTTATCGGGGCGTTACAAATGGACGGTGATGGGAGAGGGTGTGGGGATGTGATCGTACGGCAGGTAGAGGGTAATGACGTGGAGGAATCTCAAAAACAAGGTTCTCGTTGTGCAGGGGATGGAATCTCAACGGTTAAGGATTTGCGGAAATTCTACGGTTTGTTTAGATCAAGGAATGGGAAAAGAAATCGAACGGCTAATTTAGCTCTCAATGATGAAGGATGA 1422 0.443 MFHYKLIVLSFLITPIVCFVIRWLLFKTGLIYVTKKLHRKLQDCFYVYQYLKVPELNENMQRNELYRKVSLYLHSLPSLEDSDFTNLITDHNQNDIVLSLDSNQIIEDRFLGANLFWFNQKTEPGQTGVFVLKVRKTDKRRILRSYLRHIHDVADEIMKRDLRLFANVTDGETRWKSVSFNHPATFDTMAMETDLKTKIKSDLESFLKAKPYYRRLGRAWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDVDLSQVRGDSDLKFLLLETTPKSIILVEDLDRFLTGESGVTVAGIQNFMDGILSSCCGEERILVFTMSSKENIDPIFLRPGRVDVHIHFSWCDFSSFKTLACNYLGVKDHKLFSQVEEIFRNGASLSAAEISELMIANRNSPNRAIKSVIGALQMDGDGRGCGDVIVRQVEGNDVEESQKQGSRCAGDGISTVKDLRKFYGLFRSRNGKRNRTANLALNDEG* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3785 473 Pfam ATPase family associated with various cellular activities (AAA) 225 340 IPR003959 GO:0005524|GO:0016887
Psa4g3785 473 Pfam Domain associated at C-terminal with AAA 32 118 IPR025753 -
Psa4g3785 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 398 IPR027417 -
Psa4g3785 473 PANTHER BNAC04G00800D PROTEIN 12 428 - -
Psa4g3785 473 SMART AAA_5 220 344 IPR003593 -
Psa4g3785 473 CDD AAA 221 341 - -
Psa4g3785 473 Gene3D - 339 401 - -
Psa4g3785 473 PANTHER BCS1 AAA-TYPE ATPASE 12 428 - -
Psa4g3785 473 Gene3D - 173 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3785 Psa-Chr4 316993202 316995357 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3785 - K08900 gmx:100787809 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3785 4 316993202 316995357 Psa4g3785 4 316993202 316995357 ECH