Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3778 ATGGAAACCAACAAGAACATGAATCAAACAACCCCCACAACCATGGAATCCGAGTTCGAAGATTTACTACCAGTGATGGCAGAGAAACTTGATGTAGAAGCCTTTGTATCCGAACTCTGTAACGGTTTTAGGCTTCTAGCAGACCAAGAAACAGGTCTGATAACAAGTGAGAGTCTTAGGAAAAACTCAGCGATGCTTGGTATGGAAGGAATGAGTAAAGAAGATGCAGAAGCTATGGTTCAACAAGGTGATCTTGATGGTGATGGAAACTTGAATGAAACTGAGTTCTGTATATTGATGGTTAGGCTTAGCCCTGAAATTATGCAAGATGCTGAAACTTGGTTGGAGAAAGCTATTGAGGAACAGCTAAGAAATTGA 378 0.4074 METNKNMNQTTPTTMESEFEDLLPVMAEKLDVEAFVSELCNGFRLLADQETGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGNLNETEFCILMVRLSPEIMQDAETWLEKAIEEQLRN* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3778 125 PANTHER CALCIUM-BINDING PROTEIN KIC 9 124 - -
Psa4g3778 125 Pfam EF-hand domain pair 50 102 IPR002048 GO:0005509
Psa4g3778 125 ProSitePatterns EF-hand calcium-binding domain. 84 96 IPR018247 -
Psa4g3778 125 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Psa4g3778 125 SUPERFAMILY EF-hand 24 124 IPR011992 -
Psa4g3778 125 PANTHER CALCIUM-BINDING PROTEIN KIC 9 124 IPR044205 GO:0005509
Psa4g3778 125 Gene3D - 16 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3778 Psa-Chr4 316805171 316806283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3778 10 125 EF-hand Containing Proteins AT2G46600 71.552 2.27e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3778 K24345 - gmx:100802677 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3778 4 316805171 316806283 Psa4g3778 4 316805171 316806283 ECH