Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3769 ATGGCCAACTTTGTCACCATCACCACATTGTTTATGCTTGGGTTGTGTTTGATGTATACTATCTCCAATGTGAAACTTATGGCACAAGGAATTGTAATGGGAGAAACAACTAGGTTCTATGACTTTAAGGTTCAAACTAAAAGAGTTACCAAACTTTGCAACTCGAAAGAAATTGTTACCGTCAATGGTATGTATCCAGGACCTGTAGTTTATGCAGAAGAAGATGATAGAATCATAGTCAAGGTTACCAATAAGACGCCTTTCAATGTTACGATTCACTGGCATGGTATCCGGCAAAAGCTATCGTGCTGGTATGATGGACCATCCTTTATTACACAATGTCCGATTCAAGCAGGCCAGAGTTTCACCTATAATTTTACAGTGGTGAATCAGAAGGGAACTTTCTTCTGGCATGCTCATGTTTCTTGGCTAAGAGGAACAGTTCATGGAGCTATGATTGTTTATCCAAAGAATAGGGTGCCTTTCCCATTTAAGAATCCTTATCAAGAGCAAATAATCATACTAGGGGAATACTGGCTGCAGGATCTCCAACAAGTTGAGCATACCACTCTAATGAGTGGAGGAGCTCCACCTCCAGCGGATGCATATACCATTAACAGTCATCCAGGCCCCAACTATAACTGCTCCATTAACGATGTGTACCAACTTAATGTGATTCCGGGAAGGACCTACTTGTTAAGACTGATTAATGCGGGTTTAAACACCGAGAACTTCTTTGCCATTGCTAATCACAAACTAAAGATCGTGGAAGCTGATGGTGAATACACAAAGCCATTCACCACAGACACGGTGATGCTTGGACCGGGCCAAACACTGAATGTCCTAGTCTCGGCTGATCAACCAGTAGGAAAATACTCCATGGAAGTGGCACCTTACAGGTCTGGTAGGATTGTCAAATATCAAAACGTTTCGGCGATTGCCTACTTCAACTATAAAGGGGCCAAATCTGACGGTTCATATTTACCGGCTAAATTACCTAAGCTTGATGATAAGCTAGCTGTTAAGACAGTCATGGATGGATTAAGGAGCCTAAATCAAGTGAATGTTTTCAAAGAAATCGATAAAAACATATTCATCACCGTTGGATTGAATGTTCAAAAATGTCACTCAAAGACACCAAAGCGAAACTGTCAAGCCATGAATAATGGTGTGCTGACAGCTTCCATGAACAACATAAGTTTCGTTCATCCTCGTATATCAATCCTGGAAGCTTATTATAATAAAGTAAATGGATCATATACTGAAGATTTCCCCGACGCACCCTCTAAGTTCTACGATTTCGTTAATGGTGCCCCAAATAACATTCCATACAACACGGAGTCGTTGAATGGGACTAGAACTAAGGTCCTGGAATACGGTACCAAGGTGCAACTCATTTTGCAGAACACGGGGACAGTCAACGTTGAAAATCACCCAATTCACATCCATGGCTACAGCTTTTATGTTGTAGGGTATGGCGCAGGCAACTATAATCCACTAACGGCAAAATTCAATTTAGTGGATCCCCCGTACATGAATACAATCGGTGTTCCGGTGGGTGGATGGGCAGCTGTCCGTTTTGTAGCTGATAATCCAGGTGTGTGGTACATGCACTGCCACATTGATATACATCAATCATGGGGACTTGGAATGGTGTTTATAGTGAAGGATGGAAAAGGAGATCTAGAGTCCCTACCACACCCCCCATCAGACCTGCCACTATGTTAA 1728 0.4213 MANFVTITTLFMLGLCLMYTISNVKLMAQGIVMGETTRFYDFKVQTKRVTKLCNSKEIVTVNGMYPGPVVYAEEDDRIIVKVTNKTPFNVTIHWHGIRQKLSCWYDGPSFITQCPIQAGQSFTYNFTVVNQKGTFFWHAHVSWLRGTVHGAMIVYPKNRVPFPFKNPYQEQIIILGEYWLQDLQQVEHTTLMSGGAPPPADAYTINSHPGPNYNCSINDVYQLNVIPGRTYLLRLINAGLNTENFFAIANHKLKIVEADGEYTKPFTTDTVMLGPGQTLNVLVSADQPVGKYSMEVAPYRSGRIVKYQNVSAIAYFNYKGAKSDGSYLPAKLPKLDDKLAVKTVMDGLRSLNQVNVFKEIDKNIFITVGLNVQKCHSKTPKRNCQAMNNGVLTASMNNISFVHPRISILEAYYNKVNGSYTEDFPDAPSKFYDFVNGAPNNIPYNTESLNGTRTKVLEYGTKVQLILQNTGTVNVENHPIHIHGYSFYVVGYGAGNYNPLTAKFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKDGKGDLESLPHPPSDLPLC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3769 575 CDD CuRO_1_LCC_plant 40 156 IPR034288 GO:0005507
Psa4g3769 575 SUPERFAMILY Cupredoxins 164 326 IPR008972 -
Psa4g3769 575 Pfam Multicopper oxidase 171 321 IPR001117 -
Psa4g3769 575 ProSitePatterns Multicopper oxidases signature 2. 538 549 IPR002355 GO:0005507
Psa4g3769 575 CDD CuRO_3_LCC_plant 420 558 IPR034289 GO:0005507
Psa4g3769 575 SUPERFAMILY Cupredoxins 358 575 IPR008972 -
Psa4g3769 575 Gene3D - 20 156 IPR008972 -
Psa4g3769 575 Gene3D - 168 353 IPR008972 -
Psa4g3769 575 TIGRFAM laccase: laccase 37 575 IPR017761 GO:0046274|GO:0048046|GO:0052716
Psa4g3769 575 SUPERFAMILY Cupredoxins 31 179 IPR008972 -
Psa4g3769 575 Pfam Multicopper oxidase 44 158 IPR011707 GO:0005507
Psa4g3769 575 PANTHER LACCASE-6 16 575 - -
Psa4g3769 575 PANTHER MULTI-COPPER OXIDASE 16 575 IPR045087 -
Psa4g3769 575 ProSitePatterns Multicopper oxidases signature 1. 533 553 IPR033138 -
Psa4g3769 575 CDD CuRO_2_LCC_plant 171 318 IPR034285 -
Psa4g3769 575 Pfam Multicopper oxidase 441 558 IPR011706 GO:0005507|GO:0016491
Psa4g3769 575 Gene3D - 373 575 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3769 Psa-Chr4 316253162 316255383 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3769 K05909 - gmx:100789406 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3769 4 316253162 316255383 Psa4g3769 4 316253162 316255383 ECH