Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3734 ATGGCACCAAGATACAGTCGCGGAAAGGCCAAGGGAGAGAAGAAGAAGAAGGAAGAAAAGGTTCTTCCTGTTGTTATGGATATCACAGTGAACCTTCCAGATGAAACTAGTGTTGTTCTGAAGGGAATATCAACGGATAGAATAATAGATGTTCGTCGGCTTTTATCGGTGAACACGGAGACTTGTTACATTACCAACTTTTCTCTATCACATGAGATAAGAGGGACACGTTTGAAGGATACGGTGGACGTGTCCGCACTGAAGCCATGCCTCCTCACTTTAGTTGAAGAGGATTACGATGAGGAAGGTGCGGTGGCTCACGTGCGAAGACTATTGGACATTGTGGCCTGCACCACCAGCTTCGGTCCGTCGTCTCCGCCGAAGAATGGTGCAAAGTCGAGCAAATCTCAGTCGCCTCCGGCGAAGCAGTCGCCGAAAGACGCTGCGGCGGCAGACGGTGATGGAGAGATAAGCCACTCGTGCCCTAAGCTGGATAGTTTTTACGAGTTTTTTTCTCTCTCAGACCTCACTGCGCCTCTTCAATATGTGAAGAAAGCTTCGAGGCGGAACGTGGAGGAAATATCGGAGGAGGATCATCTCTTCTCGCTAGATGTGAAAGTGTGTAACGGGAAAGTGGTGCACGTTGAGGCATGCAGAAAGGGGTTTTACAGTGTTGGGAAGCAGAGGATCCTTTGTCATAATCTCGTTGATTTGTTGAGACAGATTAGCAGAGCTTTTGACAATGCTTATGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGAAATCTTCCCTATGGCTTCAGATCCAACACGTGGCTTGTTCCTCCTATTGCAGCACAATCACCATCATCTTTTCCCCCACTTCCTGTGGAGGATGAAAATTGGGGAGGAAATGGTGGTGGTCTTGGAAGAGATGGAGAGTATGATTTGATTCCTTGGGCCAATAAGTTCTCATATATTGCATCTATGCCCTGCAAGACCGCTGAAGAAAGACAAGTTCGTGATAGGAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTGCCATTTTCAGAGCAATTAGGGCTGTCAAACATGTTTTGGAAGATCCCAGTTTTAGCTGCTCAGCAGCAGAAAATGATATTTACAGTGAGATAGCAGGTGACTTGAGGATTAGAGTCTTGAAAGATGGTTCTGTTGCAAGCTGTAAGATTGATTCCAAAATTGATGGAGTTGAAGCTACAGGAGTAAATCAAAGGGATCTAGTCGAACGGAATTTACTGAAAGGGATCACTGCAGATGAAAATACTGCCGCCCACGATATTACCACTCTAGGTGTTGTTTACGTAAGATATTGTGGTTATGTGGTTGTTGTGAAAGTTGAAGGTGAAGCTAATGAAAAAGTCAATTCTTCATCTCATCAAAATAATGATTTGTTTGATCAGCCAGAGGGTGGTGCCAACGCACTAAATATTAACAGCTTAAGATTTCTTCTTCACAGTACAGCCCTACCTGAGAACAATAAACAGATGACTGAGATACAAATGTTTGAGAGTAAAGAGCTTGGTGGTACTGACGCTTTTGTAGAAAAGCTGATTGAAAAAAGCCTTGCTAAGCTTGAGGAAGAGGAACTGAGTTCGGACTATTTTGTAAGATGGGAACTAGGTGCATGCTGGGTACAACATTTGCAAGACCAAAACAGTGCAGAAAAAGATAAGAAACCATCTTTGGAGAAGACTAACAATGAAATGAAGGTCGAGGGTCTTGGGAAACCCCTTAAAGCCCTCAAGAATAATAAAAAGAAATCTGATTCAAGCAATTCAAATTTTGCATCTGAACATTCAAAATCTAATCTCGAGGCTGAAAATGCTGCATTGTCCTCTAGTGAATCCCAGCATGAAACTGCAGCAGCTGAGAATGAGCTTGTGCAGAAACGGATGTTATCTGAGGCAGCTTTTACCAGATTGAAGGAATCAGGAACTGGACTTCACTGCAAGTCTATGCAAGATTTGGTTGACTTGTCTCAGAAATACTACATGGATGTTGCTATCCCAAAACTGGTGGCAGATTTTGGCTCATTGGAACTTTCTCCAGTTGATGGTCGAACATTAACTGATTTTATGCATACTAGGGGTCTGCGGATGCGATCTCTTGGACATGTTGTCAAGCTTTCTGAAAAACTTTCACATGTGCAATCACTTTGCATTCATGAGATGATAGTTCGAGCTTTCAAGCACATCCTGAGGGCAGTTATTTCTGCAGTTGTTGACAAGGAGAAAACGGCTTCATCAATAGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAAACAGATGAATCATGCGATGTCCACCCTCTTGTGTGGAAATGGCTAGAGAGATTTTTGAAGAAACGATTTGACTGGGATCTTAACAGGTTGAACTATAAAGATGTGAGGAAATTTGCAATTCTCCGCGGCTTGTGTCACAAGGTGGGAATTGAGCTCGTTCCAAGGGATTTCGACATGGATTCTCCATTTCCCTTTACAAAGTCTGATATTGTCAGCTTGGTTGCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCCTGGAGTCCTCCAAAACAGCTTTAGACAAGGGAAAACTTGAAGATGCTGTTACCTATGGGACAAAGGCTCTTGCGAAGCTTGTAGCAGTTTGTGGCCCCTACCATCGGATGACAGCGGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCATACCGGAGACTTCAATCAGGCTACAATTTATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTTTGGATCATCCCGATACCATGAAGAGCTATGGGGATCTTGCTGTGTTCTATTACAGACTTCAGCACACCGAGCTGGCTCTTAAATATGTGAAGCGTGCTTTATACCTTTTGCATCTGACATGTGGTCCGTCTCATCCAAATACTGCCGCAACCTACATTAATGTGGCTATGATGGAGGAAGGTCTAGGAAATGTACATGTTGCTCTAAGATATCTTCACAAAGCATTAAAGTGCAACCAGAAGTTACTTGGTGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCGTTGATGGAAGCATATCCATTGAGTGTGCAGCATGAGCAGACAACTTTGCAAATTTTGCGGGCAAAGCTTGGCCCTGATGACTTGCGAACACAGGACGCTGCAGCTTGGCTTGAGTATTTTGAATCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACAAGAAAACCTGATGCATCAATAGCTAGCAAAGGCCATCTAAGTGTGTCGGATCTTCTTGACTACATTAATCCTAATCACGATACCAAAGGGAGAGACGCAGCAGCAAAGAGAAGAAACCAGGTGAGAGCGATATCCTACCAGAACAATGTCTCAGTAAGTTCTGATGAATCTTCAAAAGAAATTCAAAAAGAGGCTTCAGATGAAGAGTTACATATACCTGAACTAGAAGGTAGTGCAGAATCCGAGGATGAGAGCAACTCGGCACCTGAACCAGAACAGCCAATTTTAGAAAAGATCCCAGATGAAAAGCCACAAACTTCTAATGAATTATTGTCTGAGGCACATCCTGACGGAGATGATGGATGGCAATCAGTTCAAAGACCAAGATCAGCTGGCTCATATAGCCGGCGACTGAAACAAAGACGGGCAACACTTGGCAAAGTTCATAGTTACCAGAAAAATGTTGAAGTTGGCACTGAATATCCTTCGGTGAAGAGTGCTAATCAGAATAGTAGGTATTATTTCTTGAAGAAGCGGACAGCACACCATGGGGGCTATGCAGATAACCGCGCTGTAAACATCACTCAAGGCACTAAATTTGGAAGGAAAGCAGGCAAGGCTGTTGTTGCATACAGGGTCAAGTCTACACCCTCCGCTTCTATAACTGTTGCAAATGAAACATTAGAAATTTGTGACAAGGAACCTGATTCAATTGATGTTAATCCAGTTAAGACTTCTATAGTCAGTCTTGGAAAAAGTCCTTCATACAAGGAAGTAGCCTTGGCTCCTCCTGGGACAATCTCCAAGTTGCAGGTCTATAATCCTCAAAGTGAGACTTCTGTTTCTCGCGAACATGATGTTGGAAAGCACGAAGAGGAAAATGTTGAAGCTCAGAGAAACATCAATCCAACCCCAAAAGAAGCAAAGAACGTGTTTAAAGAGAAGTCTGATGATTCTTTATCTGATTCTATAGAAGATTCACAAGACGATACTGTAGTTTCTACTGAGAAGAAAGAAGAAACTCAGTTGAATAAAGTTGTGCAAGATAATTGTGTGGCAGCTGAGGGGCTTGAATCTGGGGACCTTGAAGCACAAGGAGCTGTTGATAAAAGCATAATGATTGATGCAGTAGAGGATGCTGTGGACTCTTACAAACAAGAACTTGTTGCAAATAACCAGCCTTGCAGCTTTGAACCTTCTGATAATACAAGTTCTAGCCCACCTGGTGGTGAGGATTTAGGGGTCAATTTATTATCACCTAGTCAGAGTCAAGCTGGAGGAATACCGTATAAGAAATTGTCTGCATCAGCAGCTCCATTCAACCCATCGCCTGCCATTGCACGCGCTGCACCTATTGCCATTAATATGACTCATCCTTCTGGTCCTGGTGCTGTTCCAGCTATTGGTCCCTGGCCAGTAAACATGAATGTTCACCCCGGACCTGTTAGCCCAATGTGTTCCTCTCCTCACCATGCATATCCATCACCTCCAACAACGCCAAACATGATACAACCATTGCCATTCATGTATCCTCCTTATTCTCAACCTCAGTCAGTACAAACCAGCAGTGCCTTTCATGCCAATCATTTTACATGGCAGTGTAATTTGAACCCCGTCATATCTAAGTTTGGTCCTGCCGCTGTTTGGACCGGCTGTCATCCTGTGGAATTTCCTCGTCCAGTACCTATTGTTGAATCAATCCCTGATATCATTTCCGAGCCACAGGTGCAGTTTCATACAGCTGAAAGTCCATGTTCAGCTCCAGTTCTGCTTGAGGACGTTGATAAGGTTGGGGATTCTAATAAAGAGGTAAAAACTTCAGGTTTGGAGATGAGTGAAGATGAACTGGTGAGAGTTGGTTCAGAAAGCATAAAAGAAAATGGTAATCCAAATTTTCCTGGAACCAACAGTGCTGGGATCGAGCCAAACCAAAATGTTGGCTCTAACAGCAACACTAGCTGCAGTGAAATGAACATGGATGATGAGAAAACATTCAGCATTTTGATTCGGGGAAGAAGAAACCGAAAGCAAACTCTGAGAATGCCAATAAGTTTACTTACTCGACCTCATGGCTCTCAGTCATTTAAGGTTATCTTTAACCGTGTCGTTAGAGGAAGTGATTCTCCGAGGTCCATAAATTTCTCTTCTAGTAAACATTGTACAGCCACTGCTTAA 5466 0.4329 MAPRYSRGKAKGEKKKKEEKVLPVVMDITVNLPDETSVVLKGISTDRIIDVRRLLSVNTETCYITNFSLSHEIRGTRLKDTVDVSALKPCLLTLVEEDYDEEGAVAHVRRLLDIVACTTSFGPSSPPKNGAKSSKSQSPPAKQSPKDAAAADGDGEISHSCPKLDSFYEFFSLSDLTAPLQYVKKASRRNVEEISEEDHLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQISRAFDNAYDDLLKAFSERNKFGNLPYGFRSNTWLVPPIAAQSPSSFPPLPVEDENWGGNGGGLGRDGEYDLIPWANKFSYIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIRAVKHVLEDPSFSCSAAENDIYSEIAGDLRIRVLKDGSVASCKIDSKIDGVEATGVNQRDLVERNLLKGITADENTAAHDITTLGVVYVRYCGYVVVVKVEGEANEKVNSSSHQNNDLFDQPEGGANALNINSLRFLLHSTALPENNKQMTEIQMFESKELGGTDAFVEKLIEKSLAKLEEEELSSDYFVRWELGACWVQHLQDQNSAEKDKKPSLEKTNNEMKVEGLGKPLKALKNNKKKSDSSNSNFASEHSKSNLEAENAALSSSESQHETAAAENELVQKRMLSEAAFTRLKESGTGLHCKSMQDLVDLSQKYYMDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISAVVDKEKTASSIAGALNLLLGVPENRETDESCDVHPLVWKWLERFLKKRFDWDLNRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPFPFTKSDIVSLVAVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDTKGRDAAAKRRNQVRAISYQNNVSVSSDESSKEIQKEASDEELHIPELEGSAESEDESNSAPEPEQPILEKIPDEKPQTSNELLSEAHPDGDDGWQSVQRPRSAGSYSRRLKQRRATLGKVHSYQKNVEVGTEYPSVKSANQNSRYYFLKKRTAHHGGYADNRAVNITQGTKFGRKAGKAVVAYRVKSTPSASITVANETLEICDKEPDSIDVNPVKTSIVSLGKSPSYKEVALAPPGTISKLQVYNPQSETSVSREHDVGKHEEENVEAQRNINPTPKEAKNVFKEKSDDSLSDSIEDSQDDTVVSTEKKEETQLNKVVQDNCVAAEGLESGDLEAQGAVDKSIMIDAVEDAVDSYKQELVANNQPCSFEPSDNTSSSPPGGEDLGVNLLSPSQSQAGGIPYKKLSASAAPFNPSPAIARAAPIAINMTHPSGPGAVPAIGPWPVNMNVHPGPVSPMCSSPHHAYPSPPTTPNMIQPLPFMYPPYSQPQSVQTSSAFHANHFTWQCNLNPVISKFGPAAVWTGCHPVEFPRPVPIVESIPDIISEPQVQFHTAESPCSAPVLLEDVDKVGDSNKEVKTSGLEMSEDELVRVGSESIKENGNPNFPGTNSAGIEPNQNVGSNSNTSCSEMNMDDEKTFSILIRGRRNRKQTLRMPISLLTRPHGSQSFKVIFNRVVRGSDSPRSINFSSSKHCTATA* 1822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3734 1821 Gene3D Tetratricopeptide repeat domain 864 978 IPR011990 GO:0005515
Psa4g3734 1821 Gene3D Tetratricopeptide repeat domain 982 1102 IPR011990 GO:0005515
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1725 1753 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1210 1241 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1405 1419 - -
Psa4g3734 1821 Pfam Translation initiation factor eIF3 subunit 135 692 834 IPR033646 -
Psa4g3734 1821 CDD CLU-central 694 835 IPR033646 -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1142 1168 - -
Psa4g3734 1821 ProSiteProfiles TPR repeat profile. 905 938 IPR019734 GO:0005515
Psa4g3734 1821 SUPERFAMILY Hypothetical protein c14orf129, hspc210 190 262 IPR023231 -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 123 143 - -
Psa4g3734 1821 SUPERFAMILY TPR-like 942 1069 IPR011990 GO:0005515
Psa4g3734 1821 Pfam Mitochondrial function, CLU-N-term 45 115 IPR028275 -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1154 1168 - -
Psa4g3734 1821 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1803 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1379 1394 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 562 581 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 598 634 - -
Psa4g3734 1821 Pfam Tetratricopeptide repeat 988 1062 - -
Psa4g3734 1821 Pfam Tetratricopeptide repeat 904 974 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 562 635 - -
Psa4g3734 1821 MobiDBLite consensus disorder prediction 123 152 - -
Psa4g3734 1821 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1803 IPR027523 GO:0006996
Psa4g3734 1821 SUPERFAMILY TPR-like 871 976 IPR011990 GO:0005515
Psa4g3734 1821 SMART tpr_5 947 980 IPR019734 GO:0005515
Psa4g3734 1821 SMART tpr_5 905 938 IPR019734 GO:0005515
Psa4g3734 1821 SMART tpr_5 989 1022 IPR019734 GO:0005515
Psa4g3734 1821 MobiDBLite consensus disorder prediction 1370 1435 - -
Psa4g3734 1821 ProSiteProfiles Clueless (Clu) domain profile. 294 570 IPR025697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3734 Psa-Chr4 313540310 313555794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3734 K03255 - gmx:100808136 2769.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3734 4 313540310 313555794 Psa4g3734 4 313540310 313555794 ECH