Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3720 ATGGGTAGAGTTAAGCACTTCCCAAGTCCAAGTAAACCCGCTGCAAGTGACAATCTTGGAAAGAAGAAAAGACGGTGTAAACCTGGAACAAAGGCGCTTCGCGAGATTCGAAAATTTCAAAAGGATGTTAAATTGCTTATACCATATGCTCCGTTTGTAAGATGTGTCAAAGAGATTACAAACCAATTATCGTCACTGGTTACACGCTGGTCGCCGGAAGCATTGATATCACTTCAGGAGGCAGTTGAGGATGATCTGGTTCGTATGTTTGAAGCTGGAATGCACTGCGCACGTCATGCAAGGCGTGTTACCCTTATGAAAAAGGATCTTGAGCTGGCCCGCAGGCTTACAGGAATAGGAAGACTTTGGTGA 372 0.4489 MGRVKHFPSPSKPAASDNLGKKKRRCKPGTKALREIRKFQKDVKLLIPYAPFVRCVKEITNQLSSLVTRWSPEALISLQEAVEDDLVRMFEAGMHCARHARRVTLMKKDLELARRLTGIGRLW* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3720 123 SMART h35 18 121 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa4g3720 123 SUPERFAMILY Histone-fold 9 119 IPR009072 GO:0046982
Psa4g3720 123 PANTHER HISTONE H3 12 123 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa4g3720 123 MobiDBLite consensus disorder prediction 1 31 - -
Psa4g3720 123 Gene3D Histone, subunit A 3 119 IPR009072 GO:0046982
Psa4g3720 123 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 12 123 - -
Psa4g3720 123 Pfam Core histone H2A/H2B/H3/H4 12 116 IPR007125 GO:0003677
Psa4g3720 123 PRINTS Histone H3 signature 18 39 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa4g3720 123 PRINTS Histone H3 signature 42 59 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa4g3720 123 PRINTS Histone H3 signature 83 99 IPR000164 GO:0000786|GO:0003677|GO:0030527
Psa4g3720 123 PRINTS Histone H3 signature 99 120 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3720 Psa-Chr4 312369225 312373254 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3720 K11253 - gmx:100811872 147.517