Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3687 ATGTCATCTCCTCTTTCACGTCTTCTATGCCTATTCCTGGCTCTCGCCGTCTTTGCCGGAGAATCTTCTCCGGCAATTGCCGCCGATGAGCTGGAGCGTGGAGGAGGCGGAGGCCACCAACAGAGAGAGTTTGACTATTTCGCTTTGGCGTTACAATGGCCTGGTACTTTTTGTAAACGCACGCGCTATTGTTGTTCCTCTAATGCTTGTTGCAGAGGCTCTAATTCTCCGGCAATATTCACCATACATGGGCTCTGGCCTGACTATAATGATGGAACGTGGCCGGCATGTTGCACCAAATCTCGTTTTGATCCAAAAGAGATATCTACATTGGATACTGCTTTAGAGCAATATTGGCCATCATTGAGCTGTGGCTCACCATCATCATGCAGTGGTGGAAAAGGTTCATTTTGGGCTCATGAGTGGGAGAAGCATGGCACATGCTCATCTCCTGTGTTTAACAATGAATATGACTATTTCTTGACAACACTTAATGTCTATTTCAAATATAATGTTACGAAAGTTCTAAACGAAGCTGGATATGTTCCGTCAAACACAGAAAAGTATCCCCTCGGAGGCATTATCTCTGCCATTGAGAATGCTTTCCATGCATCTCCTTTAATAGTTTGCTCAAAAGGTTCTGTGGAGGAGCTTCGTCTATGCTTCTATAAGGACTTCACGCCACGGGATTGTGCTATTAAACCAGGCGCAAAGATTGACATGGTTACTTCAAAAGGATCATGTCCTAAATATGTTGGCTTGCCAGAATCAATAGGGCATGATGGATTTCAGAGCCGGGTGTCTAACGATGCATCTCTATAG 822 0.4489 MSSPLSRLLCLFLALAVFAGESSPAIAADELERGGGGGHQQREFDYFALALQWPGTFCKRTRYCCSSNACCRGSNSPAIFTIHGLWPDYNDGTWPACCTKSRFDPKEISTLDTALEQYWPSLSCGSPSSCSGGKGSFWAHEWEKHGTCSSPVFNNEYDYFLTTLNVYFKYNVTKVLNEAGYVPSNTEKYPLGGIISAIENAFHASPLIVCSKGSVEELRLCFYKDFTPRDCAIKPGAKIDMVTSKGSCPKYVGLPESIGHDGFQSRVSNDASL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3687 273 Pfam Ribonuclease T2 family 44 231 IPR001568 GO:0003723|GO:0033897
Psa4g3687 273 ProSitePatterns Ribonuclease T2 family histidine active site 2. 137 148 IPR033130 -
Psa4g3687 273 Gene3D - 40 258 IPR036430 GO:0003723|GO:0033897
Psa4g3687 273 SUPERFAMILY Ribonuclease Rh-like 43 252 IPR036430 GO:0003723|GO:0033897
Psa4g3687 273 PANTHER RIBONUCLEASE 2-LIKE ISOFORM X1 38 260 - -
Psa4g3687 273 PANTHER RIBONUCLEASE T2 38 260 IPR001568 GO:0003723|GO:0033897
Psa4g3687 273 CDD RNase_T2_euk 44 250 IPR033697 -
Psa4g3687 273 ProSitePatterns Ribonuclease T2 family histidine active site 1. 80 87 IPR018188 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3687 Psa-Chr4 309715134 309718866 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3687 K01166 - gmx:100789614 409.453