Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3683 ATGTCAAAGAAGAACAATACCCGGAAGAGTAACGTTAATGGGGTCAGCAAAAAGACACAAACTTTGGTCAAAACGGAAGACATAGAGGATGCAGTGTCCTTCTTCTCCAAAGATGAAACCCACAAACTGAGAGCGGTTCTATTGGACTGGTACGATCACAACCATAGGGTTCTTCCTTGGAGAACCACCTCCAACCATAGCAATCTTAAAGAAGAAGAAGAAGAAGAAGTGGAAAAGAGAGCTTATGGTGTTTGGGTTTCTGAGATTATGCTACAGCAAACAAGGGTTCAGACTGTTATTGCTTATTATAACCGCTGGATGCTTAAATGGCCCACCATTCATCGTCTAGCAAATGCTTCTCTTGAGGAAGTGAATGAGATTTGGGCTGGTTTGGGTTACTATCGCAGAGCTCGTTTTCTTTTAGAGGGCGCGAAGAAAATAGTTGCAGAAGGAGGTGCTATTCCTAAAACAGCTTCTTTGTTAAGAAAGATTCCTGGAATCGGAGACTATACATCTGGAGCAATTGCCTCTATAGCTTTCAAAGAGGCGGTACCTGTGGTTGATGGAAATGTGATAAGGGTGATTGCCAGACTAAGGGCTGTTTCTGAAAATCCGAAAGACTCGGCAATCATTAAGAGGTTTTGGGAAATAGCAGCTCAGTTGGTCGATCCTCTTCGTCCGGGAGATTTCAATCAGGCTCTCATGGAACTTGGTGCAACCGTATGCACCCCTTTGAACCCAAACTGTTCGTCGTGTCCAGCATCAGAGTTCTGTCATGCACTATCAATCGCTAAACGTGATAGTACAGCAGCAGTTACAGATTATCCGATTAAGGGTGTGAAGGTTAAACAACGGTCCGATTTTTCAGCTGTATGTGTTGTTGAATTACTTGGAGATGAAAAACAATCTAGCAGCAAATTTGTTCTCGTAAAACGGCCCGACGAAGGATTGCTTGCCGGTCTATGGGAGTTTCCGTCTGTCCTAGTAGCCGGAGAAACTGCTCCATTAGCTAGAAGAAAAGCAACCAACTGCTTCTTGAAGAAAAATCTCAAAATTGACATAAAAAAGACTTGTGATGTTATTTTGAGGGAAGATGTCGGAGAATTCGTTCACATTTTTAGTCACATTCGTCTCAAGTTGTATGTGGAGTTGCTAGTGTTACAATTGAAAGGGAAAGACGATGATTTCTTCAAAAGCGAGGACGATGAAACTATAACTTGGAAATGTGTTGACAGCAATGCCCTCTCAAGCATGGGACTGACAACCAGTGTAAGAAAGGTAATATCGCGACGCACGTAG 1299 0.4288 MSKKNNTRKSNVNGVSKKTQTLVKTEDIEDAVSFFSKDETHKLRAVLLDWYDHNHRVLPWRTTSNHSNLKEEEEEEVEKRAYGVWVSEIMLQQTRVQTVIAYYNRWMLKWPTIHRLANASLEEVNEIWAGLGYYRRARFLLEGAKKIVAEGGAIPKTASLLRKIPGIGDYTSGAIASIAFKEAVPVVDGNVIRVIARLRAVSENPKDSAIIKRFWEIAAQLVDPLRPGDFNQALMELGATVCTPLNPNCSSCPASEFCHALSIAKRDSTAAVTDYPIKGVKVKQRSDFSAVCVVELLGDEKQSSSKFVLVKRPDEGLLAGLWEFPSVLVAGETAPLARRKATNCFLKKNLKIDIKKTCDVILREDVGEFVHIFSHIRLKLYVELLVLQLKGKDDDFFKSEDDETITWKCVDSNALSSMGLTTSVRKVISRRT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3683 432 CDD DNA_Glycosylase_C 290 428 IPR029119 -
Psa4g3683 432 Pfam NUDIX domain 305 429 IPR029119 -
Psa4g3683 432 Gene3D Hypothetical protein; domain 2 57 185 - -
Psa4g3683 432 PANTHER ADENINE DNA GLYCOSYLASE 9 428 IPR044298 GO:0006284|GO:0016798
Psa4g3683 432 SMART endo3end 90 240 IPR003265 GO:0006284
Psa4g3683 432 Pfam HhH-GPD superfamily base excision DNA repair protein 86 218 IPR003265 GO:0006284
Psa4g3683 432 SUPERFAMILY DNA-glycosylase 41 261 IPR011257 GO:0003824|GO:0006281
Psa4g3683 432 CDD ENDO3c 82 238 IPR003265 GO:0006284
Psa4g3683 432 Gene3D - 42 260 IPR023170 -
Psa4g3683 432 SUPERFAMILY Nudix 276 429 IPR015797 -
Psa4g3683 432 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 281 432 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3683 K03575 - gmx:100818278 662.529