Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3682 ATGGAGATTGGGTTTTTGGGTTTGGGGATAATGGGCAAAGCCATGTCAATCAACCTTCTACGGCATGGCTTCAAAGTCACTGTTTGGAATAGAACCCTTTCCAAGTGTGATGAACTTGTTGAACATGGTGCTTCAGTTGGAGAAACACCTGCAGCTGTAGTCAAGAAATGCAAGTATACAATTGCAATGTTATCTGATCCTTCCGCTGCTTTGTCGGTTGTGTTTGATAAGGATGGTGTTCTTGAGGAAATTAAAGGAAAAGGCTATATTGACATGTCGACCGTTGATGCCGAGACTTCTATCAAGATATCTGAGGCAATCAAAGCAAATGGCGGTGATTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGCCAACTAGTAATACTTGCTGCTGGCCATAAGGAATTATATGAGGAAGCACTTCCAGCATTTGATGTGCTCGGGAAGAAATCGTTCTTTCTCGGTGAGGTTGGAGATGGTGCAAAAATGAAACTTGTTGTCAACATGGTAATGGGAAGTATGATGAATGCTTTCTCTGAGGGACTAACACTTGCTGAAAAAAGTGGCTTGAGCCCTGGCACACTTCTTGATGTGCTGGATCTTGGTGCTATAAGTAACGGCATGTTTAAACTGAAAGGACCGTCGATGCTGAAGAACAGTTACGCCCCTGCTTTTCCACTGAAACATCAGCAGAAGGACATGAGATTGGCTCTTGCCCTTGGAGATGAAAATGCTGTACCAATGCCTGTCGCAGCTGCAGCAAATGAGGCATTCAAGAAAGCCAGAAGTATGGGATTAGGAGACCTTGATTTTTCAGCTGTCCACGAGACATTGAAATGA 855 0.4421 MEIGFLGLGIMGKAMSINLLRHGFKVTVWNRTLSKCDELVEHGASVGETPAAVVKKCKYTIAMLSDPSAALSVVFDKDGVLEEIKGKGYIDMSTVDAETSIKISEAIKANGGDFLEAPVSGSKKPAEDGQLVILAAGHKELYEEALPAFDVLGKKSFFLGEVGDGAKMKLVVNMVMGSMMNAFSEGLTLAEKSGLSPGTLLDVLDLGAISNGMFKLKGPSMLKNSYAPAFPLKHQQKDMRLALALGDENAVPMPVAAAANEAFKKARSMGLGDLDFSAVHETLK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3682 284 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Psa4g3682 284 Gene3D - 1 162 - -
Psa4g3682 284 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 IPR006115 GO:0050661
Psa4g3682 284 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 283 - -
Psa4g3682 284 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
Psa4g3682 284 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 283 IPR008927 -
Psa4g3682 284 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Psa4g3682 284 PIRSF HIBADH 1 284 IPR015815 GO:0016491
Psa4g3682 284 Gene3D - 163 284 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3682 Psa-Chr4 309541964 309544564 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3682 K18121 - gmx:100802847 502.286