Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3664 ATGGCAGAACCAGATCAAGCAAGACCATTAGCTTCAGTTAGAGTCCACCCAAGAAGCGATTATGAAGAAAAAGCTCTCAAAAAAATGAACCATAGAAGAAACCTCAAGTTATGTGGTTGTGTAACAGCAATTTTACTACTACTTTTAGTCATAGTAATTGTCATCTTAGTATTCACGGTTTTTAAGGTTAAAGATCCGACAGTAACAACAAATGAGATCCAACTCACAAACTTTGGTCTCAACCTTGTTCAACTTCCAACACCTCAAGTTAAGATCAACATGACCATGTTAGTAAACATGTCTATTAAGAATTCTAATAGAGCATCCTTTAAGGTTGGGAATAGCACAACATTGGTGTACTATCGCGGTATATCGGTAGCAGACGCGGTGATACCGGCGGGACTTGTGATCAAGGCGCGGAAGACGTCGGGGTTGAATGTTACGGTGGATGTTATGGCTGACCGCCTCGCCTCTAGTCCGGATTTGCTGAGAGATGTGCTTCTTGATACCGGCGGGACTTGTGATCAAGGCGCGGAAGACGTCGGGGTTGAATGTTACGGTGGATGTTATGGCTGA 576 0.434 MAEPDQARPLASVRVHPRSDYEEKALKKMNHRRNLKLCGCVTAILLLLLVIVIVILVFTVFKVKDPTVTTNEIQLTNFGLNLVQLPTPQVKINMTMLVNMSIKNSNRASFKVGNSTTLVYYRGISVADAVIPAGLVIKARKTSGLNVTVDVMADRLASSPDLLRDVLLDTGGTCDQGAEDVGVECYGGCYG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3664 191 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 163 - -
Psa4g3664 191 Gene3D - 52 175 - -
Psa4g3664 191 Pfam Late embryogenesis abundant protein 100 160 IPR004864 -
Psa4g3664 191 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 163 - -
Psa4g3664 191 SUPERFAMILY LEA14-like 47 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3664 Psa-Chr4 308400476 308402335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3664 - - lja:Lj0g3v0344129.1 174.481