Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3660 ATGTCGCATTTGGTAAATAAAGTCAAGAACTTCGTATCTGATAAATTCCACGGCGTGGCCAAGCCTGAAGCGAGTGTCGCCGACGTGGAATTTCAGCGCGCCACGATGAATAGTGTGGAGTACTTGGCCAGAGTCGCGGTTGATAATCCTTATTCACATTCTCTCCCTATCTGTGAGGTCAACTACTCATTCAAAAGCGACACTAGGGAGATAGTATCAGGGACAATACCAGATCCAGGGTCGTTGAAAGCAAAGGATACAACAATGGTGGATGTGCATGTGAAGGTGCCGTATAACATATTGGTGAGCTTGGCAAAGGACATTGGAGCTGATTGGGATATTGACTATCAGTTGGATGTGGGTCTTGTTATTGACCTTCCTGTTGTTGGTAACTTCACCATTCCTCTTTCTCGTAAGGGAGAGATTAAGCTCCCAAAACTTTTCTAA 447 0.4497 MSHLVNKVKNFVSDKFHGVAKPEASVADVEFQRATMNSVEYLARVAVDNPYSHSLPICEVNYSFKSDTREIVSGTIPDPGSLKAKDTTMVDVHVKVPYNILVSLAKDIGADWDIDYQLDVGLVIDLPVVGNFTIPLSRKGEIKLPKLF* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3660 148 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Psa4g3660 148 SMART why 24 141 IPR013990 GO:0009269
Psa4g3660 148 Gene3D - 18 148 - -
Psa4g3660 148 PANTHER - 1 147 IPR045043 -
Psa4g3660 148 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 147 - -
Psa4g3660 148 SUPERFAMILY LEA14-like 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3660 Psa-Chr4 308312841 308313646 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3660 - - gmx:547533 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3660 4 308312841 308313646 Psa4g3660 4 308312841 308313646 ECH