Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3593 ATGGCAAATTCATATCCTTATGTTGTTGATCTTCCTATTATAGATATTTCTGAACCATTTCAATCTTCTTCTTTAACAACTCTCTCTAAAGCATGCAGAGATTGGGGATTTTTTCATATAATCAATCATGAAGTTTCCAAAGATCTTTGTAGCCAGCTTCATTCTTTGTCTAAGTTTATCTTTAATCTTCCTTCTGATACTAAGCTTAAACTTGGTCCTTTCTCTTCTTTGAAATCTTATACACCTCACTTCATTGCTTCTCCTTTCTTTGAGAGCCTTAGAGTTGATGGACCTGACTTTTATGTTTCTGCCAAGAGTTCTCAAGATGTTTTGTTTGAAAAGCAGAATTCTAAATTCAGTGAGACACTAGAGGACTATTGTAGCAAGATGACAGACTTATCAGAAAGAATCTTGAAGCTAGTATTAATGACTTTAGGAGAAAGCTTTGAGAAGCTATTTTATGATTCTGAATTCAAAAACTGTCAAGGCTACTTAAGAATAAACAACTACGCATCACCAGAAAGAATGGATTCAGAAAACCAAGTAGAAGGACTAGGAATGCACACAGACATGAGCTGCATAACAATCCTATACCAAGACGAAATCGGCGGGCTACAAGTGAAAACACAAGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCCTTGGTGGTGAACATAGGTGACATGATGCAAGCTTGGAGTAATGATAAGTTAAGATCTTCTGAACATAGAGTGGTTTTGAAGAAGCCTGTGGAGAGATTCTCTTTGGCTTTTTTTTGGTGTTTTGAGAATGAGAAAGTGGTTTTGGCACCTCAGGAAGTTGTTGGAGATGGGAATGAGAGAGTGTATGAGCCTTTTGTGTGTTCTGAGTATTTGAAGTTTAGAGAGAATAATCAGAGAGGGAGATTTGAAAAAGTTGGTTATACTGTTAGAGATTTTGCAGGGATTAAGTACAAACTGTGA 969 0.3643 MANSYPYVVDLPIIDISEPFQSSSLTTLSKACRDWGFFHIINHEVSKDLCSQLHSLSKFIFNLPSDTKLKLGPFSSLKSYTPHFIASPFFESLRVDGPDFYVSAKSSQDVLFEKQNSKFSETLEDYCSKMTDLSERILKLVLMTLGESFEKLFYDSEFKNCQGYLRINNYASPERMDSENQVEGLGMHTDMSCITILYQDEIGGLQVKTQEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLKKPVERFSLAFFWCFENEKVVLAPQEVVGDGNERVYEPFVCSEYLKFRENNQRGRFEKVGYTVRDFAGIKYKL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3593 322 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 3 315 - -
Psa4g3593 322 Pfam 2OG-Fe(II) oxygenase superfamily 166 262 IPR044861 -
Psa4g3593 322 Gene3D - 3 296 IPR027443 -
Psa4g3593 322 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 76 IPR026992 -
Psa4g3593 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 315 - -
Psa4g3593 322 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 265 IPR005123 -
Psa4g3593 322 SUPERFAMILY Clavaminate synthase-like 8 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3593 Psa-Chr4 302636204 302638124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3593 8 293 Glycosyltransferase AT5G59530 29.195 3.82e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3593 - - gmx:100782766 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3593 4 302636204 302638124 Psa4g3593 4 302636204 302638124 ECH
Psa7g0723 7 52103087 52113146 Psa4g3593 4 302636204 302638124 ECH