Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3587 ATGGACCTCAAACAAGAAGTAGTAGAGTTTCTCGGATGCGTTCCTCTACTACAGAGGCTACCTAGTTCGTCTATAAAGAAGATATCAGAACTTGTGGTTGTTAAACACTATGAGCGAGGGGAGTATGTTGCACGTGAGGATGAACCAGGAGATGGAACTTACTTCATATGGGATGGAGAGGCTGAGGTTGTTGGATCTGTTAGTGCCCATGATGAAAATCGTCCAGAGTTCCAATTGAATAAATATGACTACTTTGGTTGTGGTTTGTCAAATACAGTTCATAATGCAGATGTTGTTGCTCTGTCTAAGCTAACATGCTTAGTGCTTCCCCGTGAGTACTTAGCACTGCTATGGCCAAAGTCTATATGGAGTTCAGAAAAATCTCCCGAGAGGTGCTCAGCTGTGGAGAATATATTGCAATTAGAACCATTAGAGGTAGATATCTTCCAAGGAATCACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGACAGCTGGTTGGACAGGCACTAGCTGCCGCATCAAAATCTGTTGACTGCCTTAAGTTACTTCATAGTTTGCATGCGTATTTTCTTCGTATAGGAGACTTACACATGCCTATCATATATCAAGTTCATCGTCTCCGCGACGGAAAGAGCTTTGCTACACGGAAAGTGGATGCAATGCAAAATGGAAAAGTCATATTCACTTTGCTGGCTTCATTTCATGGACAAGAATCAGCCTTTGACCACCAGGAAGTAGCTATGCCATCTGTCCCTGTACCAGAAATGCTTCTGCCATTTGAAGAGCTACGGGAGAGACGTCTAACTGACCCTCGCTTGCCAATAACTTACCGGAACAAAGTGGCTACTACTGAGTACATCCCCTGGCCCATAGAGATACGATTCTGTGAACCTAAAGTTGCAACAAATCAGACTAAATCTCCTCCCAGTTTGAGATACTGGTTTCGATCAAAGGGAAAACTTTCAGATGATCCGGCCTTGCATAGGTGTGTAGCAGCATTTGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCACATCGTGGGAAAGGTTTCAGGGCACGTGGCGTTAGTCTAGATCATGCAATGTGGTTTCACCGACCCATAAAAGCTGATGAGTGGGTGCTATTTGCGGTCTTCACTCCCACTGCCTACGAAGCACGCGGCTTTGTTATAGGTCATATGTTCAATCAAAAGGAAGAGCTTCTTGTAACAGTGATTCAAGAAGGTCTAACGAGGAGAGTTGATCCCGAAATTTCAGCCACCAAATCTAAGTTGTGA 1293 0.4377 MDLKQEVVEFLGCVPLLQRLPSSSIKKISELVVVKHYERGEYVAREDEPGDGTYFIWDGEAEVVGSVSAHDENRPEFQLNKYDYFGCGLSNTVHNADVVALSKLTCLVLPREYLALLWPKSIWSSEKSPERCSAVENILQLEPLEVDIFQGITLPDAPRFGKVFGGQLVGQALAAASKSVDCLKLLHSLHAYFLRIGDLHMPIIYQVHRLRDGKSFATRKVDAMQNGKVIFTLLASFHGQESAFDHQEVAMPSVPVPEMLLPFEELRERRLTDPRLPITYRNKVATTEYIPWPIEIRFCEPKVATNQTKSPPSLRYWFRSKGKLSDDPALHRCVAAFASDLIFLQVSLNPHRGKGFRARGVSLDHAMWFHRPIKADEWVLFAVFTPTAYEARGFVIGHMFNQKEELLVTVIQEGLTRRVDPEISATKSKL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3587 430 CDD CAP_ED 16 112 IPR000595 -
Psa4g3587 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 242 IPR029069 -
Psa4g3587 430 Pfam Cyclic nucleotide-binding domain 35 114 IPR000595 -
Psa4g3587 430 SUPERFAMILY cAMP-binding domain-like 5 117 IPR018490 -
Psa4g3587 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 417 IPR029069 -
Psa4g3587 430 CDD Thioesterase_II_repeat1 314 415 - -
Psa4g3587 430 PANTHER ACYL-COA THIOESTERASE 52 430 - -
Psa4g3587 430 CDD Thioesterase_II_repeat2 147 238 - -
Psa4g3587 430 Gene3D Jelly Rolls 1 124 IPR014710 -
Psa4g3587 430 PANTHER ACYL-COA THIOESTERASE 52 430 IPR003703 GO:0006637|GO:0047617
Psa4g3587 430 Gene3D - 130 419 IPR042171 -
Psa4g3587 430 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Psa4g3587 430 Pfam Thioesterase-like superfamily 162 415 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3587 5 430 Acyl Lipid Metabolism Gene Families AT1G01710 64.554 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3587 K01068 - gmx:100803260 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3587 4 302134291 302145991 Psa4g3587 4 302134291 302145991 ECH