Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3581 ATGAACAAGGACAATGAAACATATCTCAAACTTTTTCAACGAGGTTCTAATAATCATCATAGGACTTGTTTCTTCTCCAAAAAAGCTAAAGTTACCACAACCATAGTTGCTTTGTTTTGCTTAGTAGCAACTTTTTGTTATTATTTTGCCGCCTCCAATAATAACATAATTTCAGGTGATTATTTCATTCCAAATCAAAACCCTTCATCCATCCAAACAAACAAACACCAAAAACAAGAATTCCCACTTATATGCACCAATGGGAACAAGACCAATACACAAACATGTCCAAGAGACTACTATCCTACAAAACATAACCCAACAAATCAATATAGCCATGTTTGTCCCTCGTACTTTAGATGGATCCATGAAGATCTAAAGCCATGGAGAAAACAAGGAATCACAAAGGAAATGTTGAAAGAAGCAAGAGAAACAGCACACTTTAAGATTGTGATTGTGGATGGAAAGTTGTATGTGGAGAAGTATAAGAAGTCAATTCAAACAAGAGATGTTTTCACTTTGTGGGGTGTTTTGCAACTTTTAAGGTTGTATCCTGGGAAGTTGCCGGATTTGGAACTCTTGTTTGATTGTGATGATAGGCCTGTTGTTCCTTCGGATAAGTTTCATGGCCCAAATGCTTCACCACCTCCTTTGTTTAGATATTGTTCTAATCAATGGAGTTTGGATATTGTCTTCCCTGATTGGTCCTTTTGGGGATGGGCTGAGATAAATATAAAGCCATGGAATGGACTCTTGAGAGAGATAAAAGAAGGGAACAAAAAGACCAAATGGAAGGATAGAGTACCTTATGCTTATTGGAAGGGGAACCCTCTTGTTGCTGACACTAGGAAAAACCTTATGACATGCAATGTTACATCAGAAAATGATTGGAACACTCACCTATACATACAAGATTGGAGAAAAGAATCCAACGAAGGTTACAAAAAATCCGGCTTAGGGGATCAATGCACATACAGGTACAAGATATACATACAAGGTTTTGCTTGGTCTGTTAGTGAGAAATACATTTTGGCATGTGATTCCATGACATTATATGTAAAATCCGAGTACCATGATTTTTTCATGAGAGGCATGGTTCCATTACAACACTATTGGCCTATTAGAGATGATTCTAAATGCACATCTCTTAAGTTTGCTGTAGAATGGGGCAACAATCACACCGATAAGGCACAAGCAATAGGAGAGGCTGCCAGCAGATTCATACAAGAGGATTTAAACATGAACAATGTATATGATTACATGTTTAATCTTCTTAATGAGTATGCAAAGCTTTTGAGGTTCAAACCAAGTATACCTCAAGGAGCTGTGGAATTTTGTTCTGAAACAATGGCATGTGATGTAAATGGTATACAAAATAAGTTCATGGAGGAGTCAATGGTGATGTCTCCTAGTGATTCAAATCCATGCACTATTCCTCCTCCATATGATTCTTTGACACTACAAGAAGTTTTAGAGAGAAATGTTAATTCAACAAGACAGGTGGAAATTTGGGAAGATGAATATTGGTTGAATAAAAATATTGGATAA 1548 0.3669 MNKDNETYLKLFQRGSNNHHRTCFFSKKAKVTTTIVALFCLVATFCYYFAASNNNIISGDYFIPNQNPSSIQTNKHQKQEFPLICTNGNKTNTQTCPRDYYPTKHNPTNQYSHVCPSYFRWIHEDLKPWRKQGITKEMLKEARETAHFKIVIVDGKLYVEKYKKSIQTRDVFTLWGVLQLLRLYPGKLPDLELLFDCDDRPVVPSDKFHGPNASPPPLFRYCSNQWSLDIVFPDWSFWGWAEINIKPWNGLLREIKEGNKKTKWKDRVPYAYWKGNPLVADTRKNLMTCNVTSENDWNTHLYIQDWRKESNEGYKKSGLGDQCTYRYKIYIQGFAWSVSEKYILACDSMTLYVKSEYHDFFMRGMVPLQHYWPIRDDSKCTSLKFAVEWGNNHTDKAQAIGEAASRFIQEDLNMNNVYDYMFNLLNEYAKLLRFKPSIPQGAVEFCSETMACDVNGIQNKFMEESMVMSPSDSNPCTIPPPYDSLTLQEVLERNVNSTRQVEIWEDEYWLNKNIG* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3581 515 PANTHER GLYCOSYLTRANSFERASE 27 512 - -
Psa4g3581 515 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 27 512 - -
Psa4g3581 515 SMART cap10 187 435 IPR006598 -
Psa4g3581 515 Coils Coil 487 507 - -
Psa4g3581 515 Pfam Glycosyl transferase family 90 112 505 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3581 Psa-Chr4 301558272 301560933 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3581 - - gmx:100790123 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3581 4 301558272 301560933 Psa4g3581 4 301558272 301560933 ECH