Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3529 ATGGACGGAGACGACGATACCTCCGGCACGATGATCGACGAAATCTACGCGAACGGCGGCGAAGAGAGCGACCAGCGTAGTCGGAGGGCAATCATGAGCGGCGATCAACTCGACGTCGAAGCGTACGCGGCTCTATACTCAGGGCGGACGAAGATCATGCGGTTGCTATTCATTGCTAACAAAAGCAAGAACCCTACGGTACAGCTTGACACACTTCGCATGGCGTATGATGAGATTAAGAAGGGAGAGAATACTCAGTTGTTTAGGGAAGTTGTGCAGAAGATTAACGGGAGGTTGGGTCCAAACTATGAGATGGATTTGAGTTGGTGTGAAGGGGTTGATCGAAAGGCTGAACAGAAGAAAGAGAGACTCGAGAATGAGCTTAATGCTTATAGGACAAACTTGATTAAAGAAAGTATACGAATGGGATACAACGATTTTGGAGATTTTTACTATTCTCATGGTCAACTAGGAGATGCTTTTAAAAGTTATGTCCGTACCCGGGATTATTGCACTACGTCAAAGCATATAGTTCATATGTGTTTGAGTACGATTCTCGTCAGCATTGAGATGGGGCAATTTTCTCATGTCTCAAGCTATGTTAGCAAGGCTGAACAGGGAACAGATGCTCTTGACCCGATAATAATTTCCAAGCTACGATGTGCCGCAGGATTGGCAAATCTAGAGGCCAAAAAGTATAAGCTTGCTGCTCGAAAGTTTCTAGAAACAGGCCCAGAACTGAGTAGTCACTATAATGATGTAATTGCATCTCAAGATGTTGCAACATATGGGGGACTTTGTGCACTTGCAACATTTGATAGGGCGGAGTTAAAGAGTAAAGTTATCGATAATTCCAACTTCCGGAATTTCTTAGAGTTAGTACCTGAAGTAAGGGAACTGATTAATGACTTTTACTCAAGCCACTATGCTTCCTGTCTGGAATACCTTGGGAACCTCAAAGCAAATCTGTCACTTGATATACATTTGCATGACCATGTCGAGACACTTTATGATCTAATTCGTCACAAAGCCCTTATCCAGTATACACACCCATTTGTGTCTGTTGATTTGAATATGATGGCTAATGCATTCAAGACAACTGTTGTTGGACTTGAGAAAGAACTCGAAGCATTGATTACTGATAATCAGATACAGGCTCGAATTGATTCACACAACAAAATATTGTATGCACGGCACGCAGATCAAAGGAATGCCACATTTCAAAGGGTGCTAGAAACTGGAAGGGAATTTGATCGCGATGTCCGTTCCATGTTGCTGAGGTCAAATCTAATTAAGCACGACTACAATGTTAGGGCATCAAGGAAACTTTGA 1332 0.4287 MDGDDDTSGTMIDEIYANGGEESDQRSRRAIMSGDQLDVEAYAALYSGRTKIMRLLFIANKSKNPTVQLDTLRMAYDEIKKGENTQLFREVVQKINGRLGPNYEMDLSWCEGVDRKAEQKKERLENELNAYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHIVHMCLSTILVSIEMGQFSHVSSYVSKAEQGTDALDPIIISKLRCAAGLANLEAKKYKLAARKFLETGPELSSHYNDVIASQDVATYGGLCALATFDRAELKSKVIDNSNFRNFLELVPEVRELINDFYSSHYASCLEYLGNLKANLSLDIHLHDHVETLYDLIRHKALIQYTHPFVSVDLNMMANAFKTTVVGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLETGREFDRDVRSMLLRSNLIKHDYNVRASRKL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3529 443 PANTHER BNAA09G38820D PROTEIN 1 439 - -
Psa4g3529 443 SUPERFAMILY "Winged helix" DNA-binding domain 326 406 IPR036390 -
Psa4g3529 443 SMART PINT_4 331 414 IPR000717 -
Psa4g3529 443 ProSiteProfiles PCI domain profile. 232 402 IPR000717 -
Psa4g3529 443 Coils Coil 110 141 - -
Psa4g3529 443 PANTHER 26S PROTESOME SUBUNIT 6 1 439 IPR019585 -
Psa4g3529 443 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 331 414 - -
Psa4g3529 443 Pfam 26S proteasome subunit RPN7 106 280 IPR045135 -
Psa4g3529 443 Pfam PCI domain 296 397 IPR000717 -
Psa4g3529 443 Gene3D - 35 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3529 Psa-Chr4 298128678 298133158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3529 K12175 - gmx:100812958 799.66