Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3501 ATGGCAGCAAATCAAAACGTCAAGACCAGCACCACCAGCAGTAGCATTCAACAATCCCAAAACATTCTCCCAAATATATTCATTCACGGTCCTCCCAAATTCTCCATATTCCTCCAACCAAATCCTTCTCACAACTTCCACATCCTAAACCCTTCTTGTCTTCCCCCTCTCCACCAATTCATAGCCACCAATCCTCACCATGCTTCCTCCATCCACGCCATTCTCTGTACCACTCTCTTCCCCGTCAATGCAGAAGTTCTAGACCTTCTCCCCTCCCTCCGCCTTGTTTGCGCCTCAACCGCCGGAATTAATCACATTGATCTCGCTGAGTGTAAGCGTCGGGGAATCCACGTCACCGATGCCGGAAATACTTTCTCAGAGGATGTTGCTGATATGGCTGTCGGGTTGTTGATTGATAGCTTGCAACTAACACCAATGTACTTATTTCTCTGTTGTGCACTAAATGACGAAACAAGACACATTGTGAACAAACAAGTCATGTTGGCATTGGGAAAAGGAGGAATCATAGTGAATGTTGGAAGAGGTGGTCTCATTGATGAAAAGGAATTGTTAAGGTGTTTGATTGAAGGTGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGAGTTATTTTCTTTGGATAATGTTGTTCTTTCACCACATGCAGCTGTGTTAACTTCAGAGTCTTTCAATGGTATCAGCAAAGTTGTGGAAGAAAATTTGAAAGCCTTCTTTTCAAATAAGCCTCTGATTACTCCAGTTATATAG 789 0.4335 MAANQNVKTSTTSSSIQQSQNILPNIFIHGPPKFSIFLQPNPSHNFHILNPSCLPPLHQFIATNPHHASSIHAILCTTLFPVNAEVLDLLPSLRLVCASTAGINHIDLAECKRRGIHVTDAGNTFSEDVADMAVGLLIDSLQLTPMYLFLCCALNDETRHIVNKQVMLALGKGGIIVNVGRGGLIDEKELLRCLIEGEIGGAGLDVFENEPHVPKELFSLDNVVLSPHAAVLTSESFNGISKVVEENLKAFFSNKPLITPVI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3501 262 Gene3D - 147 232 - -
Psa4g3501 262 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 146 230 IPR006140 GO:0051287
Psa4g3501 262 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 68 261 IPR006139 GO:0016616|GO:0051287
Psa4g3501 262 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 148 261 - -
Psa4g3501 262 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 18 141 - -
Psa4g3501 262 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 18 141 - -
Psa4g3501 262 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 148 261 - -
Psa4g3501 262 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 147 230 IPR036291 -
Psa4g3501 262 Gene3D - 37 146 - -
Psa4g3501 262 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 65 141 - -
Psa4g3501 262 Gene3D - 233 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3501 Psa-Chr4 296308111 296309304 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3501 K15919 - psom:113272229 199.904