Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3500 ATGACGGAACAAAACAATAGCAATAGCAGCAATGAAGAATCTCAAAACAACAACAACCTCCCAAAAGTATTCCTTCACGTTCCACCCAAATTCTCCTTCGTTCTCCCACCCAATCCTTCACACAACTTTCACATCTTAAACCCCGGTGGCCTTCCCTCTCTCCACCAATTCATAGCCGCCGATCCTCACCACGCCTCCTCCATCGCCGCAATTGTCTGTAGCAATGTCTACCCGGTCACCGCCGACCTCCTCCAACTTCTCCCCTCCCTCCGTCTCATCTTCACCCCTACCGCTGGAACTGATCACGTTGATCTCTCTGAGTGTCGCCGTCGGGAAATCCAGGTTGCCGGTATCGGAAATCTTTTCTCCGAGGACGTCGCTGATATGGCTGTTGGTTTGTTGATTGACGTCAGCAGGAAAATTTCCGCCGCCGATCGCTTCTTGAGAACGCAGTTACAACCTTCCTCTTGGGATTTTCCACTTGGTTCTAAGTTAACAGGAAAAAAGATTGGAATTGTTGGTATGGGAAAAATTGGCTCAGAAGTAGCAAAGAGGCTTGAAGCATTCAGCTGCAAGATATCATACAACTCTAGAAACAAAAAATCATCAATTTCACACCCTTTCTATTCAAGTGTCTTAGAGCTTGCAACTAACACCAATGTACTTATTCTCTGTTGTGCACTAAATGACGAAACAAGACACATTGTGAACAAACAAGTCATGTTGGCATTGGGAAAAGGAGGAATCATAGTGAATGTTGGAAGAGGTGGTCTCATTGATGAAAACGAATTGTTAAGGTGTTTGATTGACGGTGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGAGCTCTTTTCTTTGGATAATGTTGTTCTGTCACCACATGCAGCTGTCTTAACTTCAGAGTCTTTCAATGGTATCAGCAAAGTTGTGGAAGAAAATTTGAAAGCCTTCTTTTCAAATAAGCCTCTGATTACTCCAGTTCTATAG 1011 0.4411 MTEQNNSNSSNEESQNNNNLPKVFLHVPPKFSFVLPPNPSHNFHILNPGGLPSLHQFIAADPHHASSIAAIVCSNVYPVTADLLQLLPSLRLIFTPTAGTDHVDLSECRRREIQVAGIGNLFSEDVADMAVGLLIDVSRKISAADRFLRTQLQPSSWDFPLGSKLTGKKIGIVGMGKIGSEVAKRLEAFSCKISYNSRNKKSSISHPFYSSVLELATNTNVLILCCALNDETRHIVNKQVMLALGKGGIIVNVGRGGLIDENELLRCLIDGEIGGAGLDVFENEPHVPKELFSLDNVVLSPHAAVLTSESFNGISKVVEENLKAFFSNKPLITPVL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3500 336 Gene3D - 63 330 - -
Psa4g3500 336 Gene3D - 123 307 - -
Psa4g3500 336 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 15 335 - -
Psa4g3500 336 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 131 304 IPR006140 GO:0051287
Psa4g3500 336 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 67 335 IPR006139 GO:0016616|GO:0051287
Psa4g3500 336 CDD HPPR 59 327 - -
Psa4g3500 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 304 IPR036291 -
Psa4g3500 336 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 15 335 - -
Psa4g3500 336 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 63 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3500 Psa-Chr4 296281777 296285178 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3500 - K15919 gmx:100777313 431.795