Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3499 ATGGCGAAAGAGCTTCCAATAGTGCTTGTTCTTGGTCCACCAACCTGCTTCTCAACTCTCGAACCACTTTACTCTCACAAGTTCAATTTCTTGAACCCCAAATCCTCAGGACTTCCCTTGCAACAATTCATGCTCGCCAACCACCACGACCCATCAACAATTTCCGCAATACTCTGTAGTGGCTTATTTCTCGTTTCCGCCGACGTCATCAGTCTCTTCCCGTCGCTCCGTCTCATTGTCAGCACTAGTGCTGGAACTGACCGCATCGACCTTCAAGAGTGCCGTCGTCGCGGCATTCAGGTTGCCGGATCTGGAGGGGCTTTGTCGGAGGATGTGGCTGATGCGGCGGTGGCGTTGCTTATTGATGTAATGAGGAAAATTACAGCGGCTGATAGATATTTGAGAACGCGGCCAAACCATTCTGACGCTTGGGATTTCCCACTTGGCAACAAGTTATCAGGCAAGCGAGTAGGGATTGTTGGATTGGGAAATATTGGCATTGAAGTGGCAAAGCGATTAGAGTCATTCAATTGCACCATCATGTACCACTCAAAACATCAAAAACCATCAATTTCTTACCCTTTCTATTCCAACGTTATCGATCTTGCAACTTCTAGTGACGCACTTGTCGTGTGTTGCGCACTAAATAACCAAACACGACACATGATAAACAAGGATGTTCTTTTGGCCTTAGGAAAAGAAGGGTTTATTGTCAATGTTGGAAGAGGTGGTCTCATTGATGAGAAGCAATTGATCAAGTGTTTGAAGGAAGGAGAAATTGGAGGTGCTGGTTTGGATGTGTATGAGAATGAGCCTCATGTTGATAAAGATCTCTTTGCAATGGATAATGTGGTTTTATCTCCACATGCAGCTGCTTACACTGGTGAAGCTATGTTGAAATTGTGTGAAGTTGCGGCAGAGAATTTAGAAGCTTTCTTCTTGAATAAGCCATTAATTACTCCAGTGATGTTGGGTTAG 978 0.4489 MAKELPIVLVLGPPTCFSTLEPLYSHKFNFLNPKSSGLPLQQFMLANHHDPSTISAILCSGLFLVSADVISLFPSLRLIVSTSAGTDRIDLQECRRRGIQVAGSGGALSEDVADAAVALLIDVMRKITAADRYLRTRPNHSDAWDFPLGNKLSGKRVGIVGLGNIGIEVAKRLESFNCTIMYHSKHQKPSISYPFYSNVIDLATSSDALVVCCALNNQTRHMINKDVLLALGKEGFIVNVGRGGLIDEKQLIKCLKEGEIGGAGLDVYENEPHVDKDLFAMDNVVLSPHAAAYTGEAMLKLCEVAAENLEAFFLNKPLITPVMLG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3499 325 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 57 322 IPR006139 GO:0016616|GO:0051287
Psa4g3499 325 Gene3D - 109 294 - -
Psa4g3499 325 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 IPR006140 GO:0051287
Psa4g3499 325 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 IPR029752 -
Psa4g3499 325 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 322 - -
Psa4g3499 325 CDD HPPR 6 313 - -
Psa4g3499 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 292 IPR036291 -
Psa4g3499 325 Gene3D - 51 317 - -
Psa4g3499 325 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 53 136 - -
Psa4g3499 325 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3499 Psa-Chr4 296266115 296270595 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3499 - K15919 gmx:100776772 466.848