Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3278 ATGGATGTGTTCACTGCTGCTGGGGTTGACGCTCTTGGTGCTTCCAACAACCAAGATCTTAACCTCTTGGAAAATGTTCCTCAAGATGGTGCATTATTTGATGCATCACAGTATGCATTCTTCGGTAAAGATGTCGCTGAGGAAGTTGAGTTGGGGGGGTTAGGCGATGAAAATGATTACATCCCTTCTGTTGAGTTCAACGAGGAGGAGTTTTTTCTCAATGCGGAAGAGGCGGAGGATGTAAGATCTTTTTCTGAAATTGATGATCTCACAACCACTTTTTTGAAGTTGAACAAAACTGTTAGTGGACCAAGAAATGCAGGAGTTATTGGTGATCGGGTGTCAAGAGAAAATTCTTCTGCTTCTGAATGGTCACAGAGGGATGATGTTCCCTACTGGGTTGACTATCACACTTGTGATAGTGAAGGTTCTCAGGATGGCAAAAGATGGTCCTCACATCCACATTCTTCTGTCACCCATCTACAAGAATCAAAGCCCTTATGCCGAACGTCGTCGTATCCTGAGCAGCAAAGGCAGCTGCAATACCACCTCGAACATCGCTCTAGTGAACCTGTTCCTAACTGGTTTGATCAGCATTTTTATGATAGTGAAACTACTGGTGATGAAAAGAGATGGTCATCACATCCACATTCCTCTATTTCACACACAGAAGAACCAAGGCCCTTGTATAGAACGTCTTCTTATCCTGACAAGAGACAAGAACTTCCTCGTTTTTCGAGCGAACCAGTTTTGGCGCCAAAATCTTCATTCACTTCTTATCCTCCCCCTGGTGGTAGGTCTCAACAATCTTCTTCAAATCACAGTACAGGCCAGTTGAATATTCCTTATGCTAGGGGAGCTCACATGGCACTGTCATCACAAAATCCCTCTCATTTATTCAATTCTGCATTACACTTGGGTGGATCAAAATATGAGCCACATTTTAGTGGAAATTTGGCCCAATTTAATACTGGCTCCCCCCTCAATAATCGGATCCAGAATCAATGGGTCAACCAAACAGGGTTGTATACTGGAGATAATTCAAACCTTCTGAATAATATGCTACAGCAACAACTATACCATCACAATGGATCAGTGTCTCCTCACTTACTGACTCAGCTGCAGCAACAGCCGCATAGATTGCCTCATCCTGTTCAGCAGTCCGCAGCCTTAATGTCAGGTTTACAGCCCCATTTATTTAATCACCATCTTTCGCCTGGATCATCCATTGGTAGAAAATATGAACATGTGCATGGTTTTGGTGATGTTAGAGAACATAGACAAAAATCAACTCGTAGACATCGGATCTCTCAACAGGGTTCTAATGCCAGTAGCCAGAAGAGCGATAGTTGTTCAATACAATTCAGGTCCAAGTATATGACTAGTGAAGAAATTGAGAGTATTCTTAAAATGCAACTTGCCGTGACTCATAGTAATGACCCATATATCGATGACTATTATCACCAAGCTTGTCTTGCAAAAACACCTTCTGGGGCTAAATTTAAATTTTCATTTTGCCCAGCCAAAATAAAGGATATTTCCTCACGATCTCGTGCCAATTCTGAGCCATACAGGTTTCTTCAGGTTGACACTTTAGGGAGGGTTTCTTACTTGCCTATTCGTCAGCCTCGCCCTCTTCTTGAAGACGATCCTCCAAACTCCTCTGCTAGTGGTGGCTCTGAGCGAAATATTTCAGAGAAGCCCCTTGAGGGGGAGCCTTTGTTTGCAGCCAGAGTCACAATTGAGGATGGTCTCTGTCTTCTTCTTGATGTAGATGATATTGATCGTTTCCTAAAGTGCAATCTGCTTCAAGATGGTGGAACTCAATTCTTACGAAGAAGGAGTGTCCTTCTGGAAGGATTAGCAACATCACTCCATCTTGTGGACCCACTGGGAAAGAATGGACACAAAGCTGGGCTTGCTGCTAAGGATGATCTTGTTTTCTTGCGATTAGCATCTCTTACCAAGGGAAGGAAGCTCCTAGCAAAGTATCTTCGGTTGCTTGTTCCCGGTAGTGAGCTTATGAGGATTGCCTGCATGGCTATATTTCGTCATTTAAGATTCTTATTTGGTAGTATCTCTTCTGATTCAGCATTAGCGGAGACTACAAGTGATCTTGCTATGGTTGTTTGTCAGTGTGTCCAAGGAATGGATCTTGGTTCTCTTGGTGCTTGTCTTGCAGCAGTTGTTTGTTCCTCAGAGCAGCCTCCTCTTCGTCCCATTGGAAGCTCTGCCGGAGATGGTGCTTCCCTTGTTTTAGTGTCTGTCCTCGAGGGGGCTACTAAACTTCTAACTGATCATCACGCCGCTTCTAACAATAAATTGGGCAATCGCCCATTTTGGCAGGCCTCATTTGATGAATTTTTTGACCTCCTCACGAAGTATTGCATGAATAAGTACCAGAGTATCATGCAGTCACTGCTTACACAAGGGGCACAGAACAGACCTGTGATTGGATCAGATGCTGCTAAATCAGTTAGTAAGGAAATGCCGGTTGAGCTTCTACGTGCAAGTCTTCCTCACACCAATGATCGCCAGAGAAAGTTATTACTAGATTTCGCTCAGCGCTCTTTGCCGGTGGTTGGATTTAACAACTATGCTGGGAGCAGTACTAGCCGCGTGAACTCAGAGAGGGTGATTAGTTGA 2646 0.4384 MDVFTAAGVDALGASNNQDLNLLENVPQDGALFDASQYAFFGKDVAEEVELGGLGDENDYIPSVEFNEEEFFLNAEEAEDVRSFSEIDDLTTTFLKLNKTVSGPRNAGVIGDRVSRENSSASEWSQRDDVPYWVDYHTCDSEGSQDGKRWSSHPHSSVTHLQESKPLCRTSSYPEQQRQLQYHLEHRSSEPVPNWFDQHFYDSETTGDEKRWSSHPHSSISHTEEPRPLYRTSSYPDKRQELPRFSSEPVLAPKSSFTSYPPPGGRSQQSSSNHSTGQLNIPYARGAHMALSSQNPSHLFNSALHLGGSKYEPHFSGNLAQFNTGSPLNNRIQNQWVNQTGLYTGDNSNLLNNMLQQQLYHHNGSVSPHLLTQLQQQPHRLPHPVQQSAALMSGLQPHLFNHHLSPGSSIGRKYEHVHGFGDVREHRQKSTRRHRISQQGSNASSQKSDSCSIQFRSKYMTSEEIESILKMQLAVTHSNDPYIDDYYHQACLAKTPSGAKFKFSFCPAKIKDISSRSRANSEPYRFLQVDTLGRVSYLPIRQPRPLLEDDPPNSSASGGSERNISEKPLEGEPLFAARVTIEDGLCLLLDVDDIDRFLKCNLLQDGGTQFLRRRSVLLEGLATSLHLVDPLGKNGHKAGLAAKDDLVFLRLASLTKGRKLLAKYLRLLVPGSELMRIACMAIFRHLRFLFGSISSDSALAETTSDLAMVVCQCVQGMDLGSLGACLAAVVCSSEQPPLRPIGSSAGDGASLVLVSVLEGATKLLTDHHAASNNKLGNRPFWQASFDEFFDLLTKYCMNKYQSIMQSLLTQGAQNRPVIGSDAAKSVSKEMPVELLRASLPHTNDRQRKLLLDFAQRSLPVVGFNNYAGSSTSRVNSERVIS* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3278 881 PANTHER PROTEIN PAT1 HOMOLOG 16 192 - -
Psa4g3278 881 PANTHER PROTEIN PAT1 HOMOLOG 191 860 - -
Psa4g3278 881 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 191 860 IPR039900 GO:0000290
Psa4g3278 881 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 16 192 IPR039900 GO:0000290
Psa4g3278 881 MobiDBLite consensus disorder prediction 242 276 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 144 176 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 435 449 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 207 224 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 150 176 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 260 276 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 207 230 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 423 449 - -
Psa4g3278 881 MobiDBLite consensus disorder prediction 543 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3278 Psa-Chr4 278050118 278058651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3278 K12617 - gmx:100779096 1218.37