Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3253 ATGGAATCTGTTAAGCCTTCAGCCGTGACGCCACGGAAGAGTAAATTGTCTCGAACTCTTTCAAAGGTTCTTCGTGTAAAATCAATGACTGGAATTGCACAAGTTGAGGGACTGCAGAATGTTAAAGTTGACGAAGGAAATATGACACATAGTGAAGAGGATGAAGAGCTTGAGAAAAAACTGGTTGTGGAAGCTTTGGTTTCGAGAGTTTTTGCTAGCATTTCGACTATAAAAGCTTCATATGCTCAGCTACAATATGCTCAATCGCCTTATGACCCTGATGGAATTCAAGATGCTGATAAACTACTAGTCTCGGAATTGAAAACCTTATCTGAACTAAAGCAATGTTGGTTCAGAAAACAATTTCATTTTGATCCTTCGCCAGAGGGGGCGATTGTTGCAGCCGAATCAAAAGAGCTTAAGAGTGTTATAAAAACCTATAAGATAATGGGAAAGAAGTTTGAATCGCAAACACGGCTTAAAGACTCTGAGATCATGTTTCTTAAAGAGAAGTTAGACGAGGCAAATAAACAAAACAAGTCAATTGAGAAGAGGTTAAATCAAAATAGTTCATTATCTTCTCTTGATAATCTTCACATCTCAGGACTAAGTCCTACACATTTTATATCCGTTCTTCGCCACACGGTTAAATCAATCAGAAGCTTTGTCAAGTTGTTGGTGAATGAAATGAGATCTGCCGGTTGGGATATCGATGCATCAGTGAATGCTATTGTCGGAGAGAATGTTATTTATTTGAAAGAAGATCACAAGTGTTATGCAATCGAGTCTTTTGTTTGTAGGGAGATGTTCGATTCTTTCAACTTTCCTAATTACAATCTCCGTCCTACCGAGTTTCTTCCCGATAGAAAGAAAACACAGTTTTTCTTTTCGAATTTCAACGAGTTAAAATCCGCGAAAGCAGAAGAGTTTCTCGGTTCAAAACCAAAATCAGCTTTTGCAAAGTTTTGCAGGGCGAAATACTTAAGACTAGTTCACCCTCAAATGGAGGCATCGTTTTTGGGTGACACGAAGCTGAGAATCAACATGGTGAACGGAGGAGAATTTCCCGATAACAACAACTTGTTCACATCATTTGCTGAAATGGCGAAAAGGGTATGGCTGTTGCATTGCTTAGCCTTTTCTTTTGAACCTGAAGCTGAAACCTTTCAAGTAGGGAAAGGATGTAGATTCTCTGATGTTTACATGGAGAGTGTTGTGAATGTGAATGATGATGAAGTAGCAATATCAGTGGAATGTGAGCCACAAGTTGGTTTCACTGTGGTTCCAGGTTTTAAGATAGGTAAAACTGTTATACAGTGCCAAGTTTACCTCTCACAGCTATTACAGCAAAAAGCTCAAGTTAAAGAAAGTGTTAGTTCCATGAAGCAAAGGTAG 1395 0.3878 MESVKPSAVTPRKSKLSRTLSKVLRVKSMTGIAQVEGLQNVKVDEGNMTHSEEDEELEKKLVVEALVSRVFASISTIKASYAQLQYAQSPYDPDGIQDADKLLVSELKTLSELKQCWFRKQFHFDPSPEGAIVAAESKELKSVIKTYKIMGKKFESQTRLKDSEIMFLKEKLDEANKQNKSIEKRLNQNSSLSSLDNLHISGLSPTHFISVLRHTVKSIRSFVKLLVNEMRSAGWDIDASVNAIVGENVIYLKEDHKCYAIESFVCREMFDSFNFPNYNLRPTEFLPDRKKTQFFFSNFNELKSAKAEEFLGSKPKSAFAKFCRAKYLRLVHPQMEASFLGDTKLRINMVNGGEFPDNNNLFTSFAEMAKRVWLLHCLAFSFEPEAETFQVGKGCRFSDVYMESVVNVNDDEVAISVECEPQVGFTVVPGFKIGKTVIQCQVYLSQLLQQKAQVKESVSSMKQR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3253 464 Coils Coil 165 192 - -
Psa4g3253 464 Coils Coil 444 464 - -
Psa4g3253 464 PANTHER OS01G0203800 PROTEIN 1 444 - -
Psa4g3253 464 Pfam Plant protein of unknown function (DUF641) 62 185 IPR006943 -
Psa4g3253 464 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 444 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3253 Psa-Chr4 276130052 276134863 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3253 - - gmx:100818091 619.772