Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3006 ATGGAGTTTTTCAACAAATCAAAAACCGTGAAACTCCGAAGCCACCTCGGCAAGTACCTAGTAGCAGACGAAAACCACAACAACCACCTCCGTCAAAGCAAAAAAGGAGCAACCAAAACAGCACTATGGTTAATCGAACCAGTCGAAACAAAACCCCACCACATACGGCTTCGGAGCCACAACGGTCGCTACCTAACCGCAACCGACACGCCGTTTCTCCTCGGCATGACCGGAGACAAAGTCATTCAATCCGAATACGACGCGGGGTTGAGCTGGAAATACGAATGGGAACCGATAAAGGAAGGGTTCAACGTGAAACTGAGGAGCTGGTGTGGGAAGTTGTTGAGAGGGAACGGCGGAACGCCGCCGTGGAGAAACTCTATCACGCATGATGATCCTTATACTGCTGCTACGAATAATTGGATTCTTTGGGGTGTTGAGGCTGTGGATGATAAGATGAATGTTGAGTTGATGAATAGAGTTAGTTTTGTTTCTAATTCTTCGTTTGGTTCTGGGGATGACGAGGTTCACGATTCTGAATTGGTTTCTGAGAAGAAGAAGTCTTGGTCTTCGTTGAAAGTTCGTCGGAATTCAAAGTTGCAGCCAGAGAAAACTACCACCACCACCAACAACAACAACAACAGCTTCACCTCTTCATCAATGGAGTTTTTCCAACGCGCCAAAGCCGTTCGCCTCCGAAGCCACCACGACAAATACCTCCACGCCGAAGAAGACGAAGAATCCATCAACCAAGAACGCAACGGCTCATCCAAAAACGCCAAATGGACAGTCGAACACATCCCCGAATTCGACAACATCATCCGCCTCAAAAGCTGTTACGGCAAATACTTAACAGCCTCCAATCAGCCGTTACTCCTTGGCGTCACCGGCCGCAAAGTCGTTCAAACACTGCCGCGGAGACTCGACTCCTCCGTTGAATGGGAGCCTGTTAGAGACGGTGCGCAGGTTAAGCTGAAAACGAGATACGGTAATTTTCTGAGAGCTAATGGTGGGTTACCACCTTGGAGAAATTCTGTTACGCATGATATTCCTCACAGGAGTGCTACGCAGGATTGGATTCTTTGGGATGTTGATGTTCTTGAGATTCATGTTGGGAATCCTCCTCCTCCTCCGATTCCTCATTCGGATTCTCTTGACTTTGGATCTTCGGCGCTTTCTTTCAAATCTAATCGGTTCGATAGACAAGAGTCAACAGATAGTGTTGGTTCGCCACCGAAGATGGAGGGGAGAACGATATACTACCATGTTGCTGAGGAAAATGGAGACGTGGATGATGAGAATGTGCAGGGCTATTCCTTAGTCTTCAATGGGAATGATGTCGAGCAGTTGACTCGTAAGTTCGTGGAAGAAACCGGACTTGATGGAGTTATTGTGTGCAGTCGAAGTCCTTTGAATGGAAAACTTTACCCTCTTCGCTTGCATCTTCCTCCAAACAATGTTACAATGCAAGTTGTTTTGGTCCTTGCCTCCTCGAAAGTTGCAAAAGAATTTGAAGAACAGGGTTTACTGTGA 1533 0.471 MEFFNKSKTVKLRSHLGKYLVADENHNNHLRQSKKGATKTALWLIEPVETKPHHIRLRSHNGRYLTATDTPFLLGMTGDKVIQSEYDAGLSWKYEWEPIKEGFNVKLRSWCGKLLRGNGGTPPWRNSITHDDPYTAATNNWILWGVEAVDDKMNVELMNRVSFVSNSSFGSGDDEVHDSELVSEKKKSWSSLKVRRNSKLQPEKTTTTTNNNNNSFTSSSMEFFQRAKAVRLRSHHDKYLHAEEDEESINQERNGSSKNAKWTVEHIPEFDNIIRLKSCYGKYLTASNQPLLLGVTGRKVVQTLPRRLDSSVEWEPVRDGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRSATQDWILWDVDVLEIHVGNPPPPPIPHSDSLDFGSSALSFKSNRFDRQESTDSVGSPPKMEGRTIYYHVAEENGDVDDENVQGYSLVFNGNDVEQLTRKFVEETGLDGVIVCSRSPLNGKLYPLRLHLPPNNVTMQVVLVLASSKVAKEFEEQGLL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3006 510 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Psa4g3006 510 Pfam Domain of unknown function (DUF569) 221 362 IPR007679 -
Psa4g3006 510 Gene3D - 3 143 - -
Psa4g3006 510 SUPERFAMILY Actin-crosslinking proteins 5 146 IPR008999 -
Psa4g3006 510 MobiDBLite consensus disorder prediction 201 218 - -
Psa4g3006 510 PANTHER ACTIN CROSS-LINKING PROTEIN 205 507 - -
Psa4g3006 510 PANTHER ACTIN CROSS-LINKING PROTEIN 1 149 - -
Psa4g3006 510 SUPERFAMILY Actin-crosslinking proteins 225 366 IPR008999 -
Psa4g3006 510 MobiDBLite consensus disorder prediction 193 218 - -
Psa4g3006 510 MobiDBLite consensus disorder prediction 241 260 - -
Psa4g3006 510 Gene3D - 227 347 - -
Psa4g3006 510 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 149 - -
Psa4g3006 510 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 205 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3006 Psa-Chr4 244249866 244256471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g3006 - - mtr:MTR_8g061880 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3006 4 244249866 244256471 Psa4g3006 4 244249866 244256471 ECH