Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2953 ATGGATGCTTTGCCTATTCAGGAACTTGTTGATTGGGATCATAAAAGCAAAGTAGATGGAAAAATGCACGCTTGTGCTCACGATGCGCATGTTGCGATGCTTCTTGGTGCTGCAAAGATACTTCAAGAAATGAAAGACAAGTTAAAGGTTACTATTGTTCTTATATTCCAACCAGCGGAGGAAAGAGGCGTAGGTGCGAAAGATATGATCCAAGAAAACGTGATTGAAGATGTAGAGGCAGTTTTTGGATTGCATTTAGCGACACAGTATCCCTTAGGTGTTGTTGCGTCGAGGCCCGGAGATTTTTTAGCCGGATGTGGAAGCTTCAAAGCAAAGATCAAAGGGGATTTAGCAAGAATTCGACAGTGTTGTTTTGATACTGTTTTGGCCGCCTCAGCATCTGTGATTAGCTTGCAAAACATTGTTTCGAGGGAGGTGGATCCCTTAGATTCGCAGGTGGTTTCCGTGGCAATGATTCAAGCCGTGTCTGGTCATGAACTCTTTCCTGATTCTGTTACATTTGGAGGTACTTATAGAGCTTTCGGCAAAAAGAACTTCAATGCTCTAAGGCAAAGGATAGAAGAGGTTATCAAAGGGCAAGTAGAAGTTCATAGGTGCTCAGCAGAGGTTGACTTCTTTGGTAAAGAACATCCAACAATTCCTCCAACAACAAATGATGAGAGAATCTACCAACTAGCCAAACAAGCCTCAAGCATGATTGTTGGAGAAGAGAACATTGAACTAGCACAAACGTTCACCGCGAGTGAAGATTTTGCATTTTTCTTAGAAAAAGTGCCTGGCTCATTACTCCTTTTAGGGTGTGGATCCAAATATTCTGCACATAGTTCTCACTTTTTCATTGATGAAGATGTTCTTCCAATTGGTGCTGCAATACATGCTGCATTTGCTCTTTCATATCATTCACATTCAACTATTTCTTATCACAAATGA 951 0.4132 MDALPIQELVDWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKDKLKVTIVLIFQPAEERGVGAKDMIQENVIEDVEAVFGLHLATQYPLGVVASRPGDFLAGCGSFKAKIKGDLARIRQCCFDTVLAASASVISLQNIVSREVDPLDSQVVSVAMIQAVSGHELFPDSVTFGGTYRAFGKKNFNALRQRIEEVIKGQVEVHRCSAEVDFFGKEHPTIPPTTNDERIYQLAKQASSMIVGEENIELAQTFTASEDFAFFLEKVPGSLLLLGCGSKYSAHSSHFFIDEDVLPIGAAIHAAFALSYHSHSTISYHK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2953 316 SUPERFAMILY Zn-dependent exopeptidases 1 307 - -
Psa4g2953 316 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 314 IPR017439 GO:0016787
Psa4g2953 316 Pfam Peptidase family M20/M25/M40 1 303 IPR002933 GO:0016787
Psa4g2953 316 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 1 314 - -
Psa4g2953 316 TIGRFAM amidohydrolases: amidohydrolase 1 295 IPR017439 GO:0016787
Psa4g2953 316 Gene3D Zn peptidases 1 300 - -
Psa4g2953 316 SUPERFAMILY Bacterial exopeptidase dimerisation domain 123 221 IPR036264 -
Psa4g2953 316 Gene3D - 104 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2953 Psa-Chr4 238285165 238300426 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2953 K14664 - gmx:100780711 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2953 4 238285165 238300426 Psa4g2953 4 238285165 238300426 ECH